Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SYNGAP1Q96PV0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SYNGAP1Q96PV0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.4□□□□□ -1.7
SYNGAP1Q96PV0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SYNGAP1Q96PV0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.4□□□□□ -1.7
SYNGAP1Q96PV0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SYNGAP1Q96PV0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SYNGAP1Q96PV0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SYNGAP1Q96PV0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-545P-201ENST00000362681 104 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 RNA5SP126-201ENST00000365092 109 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 RNY3P4-201ENST00000384428 101 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 MIR199A2-201ENST00000385289 110 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 RPS12P23-201ENST00000419579 400 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 AL139247.1-201ENST00000422768 325 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 AC010285.1-201ENST00000470580 392 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 ANXA2P1-201ENST00000505539 926 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 SNORA25.14-201ENST00000516481 132 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 RNA5SP165-201ENST00000517142 115 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 AC087441.2-201ENST00000529141 262 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 MIR6715B-201ENST00000637172 77 ntBASIC4.4□□□□□ -1.71
SYNGAP1Q96PV0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 RNY1-201ENST00000364228 113 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 SNORD78.2-201ENST00000391076 69 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 AL139156.1-201ENST00000412785 841 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 AL356867.1-201ENST00000429623 299 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 Y_RNA.638-201ENST00000459374 113 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 KC877373.1-201ENST00000479066 408 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 SCARNA15.2-201ENST00000516409 127 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 RNA5SP164-201ENST00000516533 110 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 RNA5SP291-201ENST00000517222 105 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 AP002392.1-201ENST00000537692 208 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 MIR3910-1-201ENST00000580936 111 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 AC010620.2-201ENST00000600135 313 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 AP002826.1-201ENST00000608835 315 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 AL773545.4-201ENST00000637262 310 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 U6.99-201ENST00000637524 83 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 AL513478.4-201ENST00000641636 310 ntBASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNGAP1Q96PV0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AC009541.1-201ENST00000438279 2662 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AC233981.2-201ENST00000611524 1614 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AC090740.1-201ENST00000623193 2262 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-222P-201ENST00000362438 107 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-336P-201ENST00000364891 107 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AL035423.1-201ENST00000420331 213 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 RPL27AP8-201ENST00000424277 446 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 Z82188.1-201ENST00000436709 154 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AC124916.1-201ENST00000444020 547 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AL078601.1-201ENST00000444542 271 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 ANP32BP2-201ENST00000454525 545 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 RPS29P27-201ENST00000463711 170 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 RPS20P22-201ENST00000473700 357 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AC107393.1-201ENST00000512403 346 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 MIR2355-201ENST00000517199 87 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 AC097372.5-201ENST00000623665 376 ntBASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SYNGAP1Q96PV0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 AL049781.1-201ENST00000623195 3585 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-527P-201ENST00000363425 104 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-378P-201ENST00000384324 107 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 MIR124-3-201ENST00000384866 87 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 MIR708-201ENST00000390708 88 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 Y_RNA.581-201ENST00000391017 97 ntBASIC4.37□□□□□ -1.71
SYNGAP1Q96PV0 RNU6-493P-201ENST00000391321 108 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms