| CLUAP1 | Q96AJ1 | AC027290.2-201 | ENST00000623210 | 18662 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | C6orf10-209 | ENST00000612031 | 2179 nt | APPRIS ALT2 TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AL136164.4-201 | ENST00000625013 | 2135 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | BTAF1-204 | ENST00000544642 | 6938 nt | APPRIS ALT1 TSL 5 BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC084357.3-201 | ENST00000541353 | 2751 nt | TSL 5 BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.14-201 | ENST00000362415 | 103 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | RNU6-1301P-201 | ENST00000362724 | 104 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | RNU5F-3P-201 | ENST00000363767 | 117 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | RNU6-622P-201 | ENST00000384272 | 103 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.504-201 | ENST00000384481 | 104 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | RNU6-748P-201 | ENST00000384648 | 107 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.562-201 | ENST00000384695 | 113 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | RNU6-130P-201 | ENST00000411112 | 103 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | UTS2B-203 | ENST00000427544 | 676 nt | APPRIS P1 TSL 1 (best) BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AL132875.2-201 | ENST00000436418 | 325 nt | TSL 5 BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC013727.2-201 | ENST00000447761 | 545 nt | TSL 4 BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | PPIAP15-201 | ENST00000479662 | 484 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AP001025.1-201 | ENST00000486139 | 332 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC010469.2-201 | ENST00000496412 | 480 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC026726.1-201 | ENST00000512859 | 601 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | RNU6-1012P-201 | ENST00000516606 | 109 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AF233439.1-201 | ENST00000526235 | 401 nt | TSL 3 BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC046158.1-201 | ENST00000563408 | 719 nt | TSL 3 BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | LINC01206-214 | ENST00000610910 | 456 nt | TSL 5 BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | DLD-214 | ENST00000639772 | 421 nt | TSL 5 BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | LINC02555-201 | ENST00000563933 | 1951 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | DMD-207 | ENST00000378677 | 13932 nt | APPRIS ALT2 TSL 5 BASIC | 5.03 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | DEUP1-201 | ENST00000298050 | 2664 nt | APPRIS P1 TSL 5 BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | CD84-206 | ENST00000368054 | 8181 nt | APPRIS P3 TSL 1 (best) BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | LINC02471-203 | ENST00000641941 | 4752 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | VPS13A-206 | ENST00000376646 | 2262 nt | TSL 5 BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | DOCK7-219 | ENST00000635253 | 6423 nt | APPRIS ALT2 TSL 5 BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AL353746.1-201 | ENST00000566293 | 6881 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SPRR2C-201 | ENST00000290702 | 219 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.483-201 | ENST00000384380 | 101 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MRPL35P1-201 | ENST00000404272 | 572 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC118345.1-201 | ENST00000411785 | 366 nt | TSL 3 BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC244670.1-201 | ENST00000436879 | 112 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | HMGB1P37-201 | ENST00000439613 | 609 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC016700.2-201 | ENST00000446011 | 156 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC107626.1-201 | ENST00000471084 | 183 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RPS4XP22-201 | ENST00000480755 | 780 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC091874.1-201 | ENST00000511402 | 339 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SNORA31.6-201 | ENST00000516241 | 130 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU5B-3P-201 | ENST00000516601 | 115 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-567P-201 | ENST00000516746 | 107 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC022868.1-201 | ENST00000517767 | 391 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | YPEL5P3-201 | ENST00000547227 | 352 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC007493.1-202 | ENST00000567899 | 517 nt | TSL 2 BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC023043.4-201 | ENST00000612081 | 449 nt | BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | VGLL4-219 | ENST00000638314 | 93 nt | TSL 5 BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AJ009632.2-204 | ENST00000635621 | 1401 nt | TSL 5 BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | CFHR4-202 | ENST00000367416 | 2178 nt | APPRIS P1 TSL 2 BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MS4A14-208 | ENST00000531783 | 2910 nt | APPRIS ALT2 TSL 5 BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | ABCC9-201 | ENST00000261200 | 8293 nt | APPRIS P5 TSL 5 BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | LLPH-201 | ENST00000266604 | 7746 nt | APPRIS P1 TSL 1 (best) BASIC | 5.02 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MPDZ-215 | ENST00000541718 | 7603 nt | APPRIS P3 TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | PAPOLA-202 | ENST00000392990 | 2588 nt | TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | ARAP2-210 | ENST00000618163 | 2592 nt | TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNA5SP295-201 | ENST00000362655 | 121 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SNORD115-8-201 | ENST00000363856 | 82 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SNORD115-38-201 | ENST00000365037 | 82 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-806P-201 | ENST00000365147 | 105 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNA5SP283-201 | ENST00000365604 | 119 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SNORA26.3-201 | ENST00000391119 | 136 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RPS26P42-201 | ENST00000413485 | 326 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | LINC01048-201 | ENST00000414480 | 511 nt | TSL 2 BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | PTGES3P4-201 | ENST00000426243 | 356 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | EIF1P2-201 | ENST00000428233 | 350 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RPS15AP5-201 | ENST00000436276 | 388 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RPL39P29-201 | ENST00000447779 | 157 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AL162151.2-201 | ENST00000448875 | 158 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC092440.1-201 | ENST00000512563 | 571 nt | TSL 4 BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-1023P-201 | ENST00000516137 | 106 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AP005436.2-201 | ENST00000528458 | 252 nt | TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC013762.1-201 | ENST00000531136 | 467 nt | TSL 3 BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC026894.1-202 | ENST00000533843 | 477 nt | TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | LINC02442-202 | ENST00000540761 | 382 nt | TSL 2 BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | POC1B-211 | ENST00000549504 | 581 nt | TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC096772.1-201 | ENST00000609146 | 564 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | CENPF-206 | ENST00000614578 | 528 nt | TSL 5 BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MIR376A1-201 | ENST00000616574 | 68 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC068831.7-201 | ENST00000616954 | 363 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC006111.3-201 | ENST00000622137 | 383 nt | BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RTN4-209 | ENST00000405240 | 4061 nt | TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RPAP2-203 | ENST00000610020 | 16993 nt | APPRIS P1 TSL 1 (best) BASIC | 5.01 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SNHG14-215 | ENST00000551631 | 4008 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | NCOA1-203 | ENST00000395856 | 6828 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | NCOA1-202 | ENST00000348332 | 6895 nt | APPRIS P4 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | LRRN3-203 | ENST00000422987 | 3513 nt | APPRIS P1 TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | ANO3-204 | ENST00000531568 | 3117 nt | APPRIS ALT2 TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | CHM-205 | ENST00000615443 | 2821 nt | TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.26-201 | ENST00000362539 | 101 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SNORD81.1-201 | ENST00000363064 | 77 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-198P-201 | ENST00000384258 | 104 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SNORD115-46-201 | ENST00000390982 | 71 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | UBA52P6-201 | ENST00000399822 | 382 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AP000567.1-201 | ENST00000406413 | 156 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC239803.1-203 | ENST00000411978 | 452 nt | TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC096649.2-201 | ENST00000416186 | 393 nt | BASIC | 5 | □□□□□ -1.61 | | |