Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 RNU6-1035P-201ENST00000384477 107 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 RPL21P17-201ENST00000397467 475 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 AL033519.2-201ENST00000403958 392 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 RN7SKP177-201ENST00000410567 355 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 AL035461.1-201ENST00000421490 332 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 YME1L1P1-201ENST00000429435 297 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 HIGD1AP2-201ENST00000446367 280 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 U8.22-201ENST00000459141 133 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 AC022795.1-201ENST00000473808 480 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 UBE2CP3-201ENST00000502715 450 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 PPBPP1-201ENST00000510807 373 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 AC027288.2-201ENST00000553028 243 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 AC244505.7-201ENST00000599675 272 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 Y_RNA.772-201ENST00000606692 102 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 AC069200.1-201ENST00000609511 323 ntBASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMEM40Q8WWA1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 RNA5SP119-201ENST00000362715 117 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 RNU6-336P-201ENST00000364891 107 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 RNU6-658P-201ENST00000384606 106 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AL591043.1-201ENST00000432461 424 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AL451050.1-201ENST00000450126 415 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 SSXP4-201ENST00000451349 245 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 RNU7-87P-201ENST00000459343 62 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 RPL30P10-201ENST00000488148 337 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 RNU6-1282P-201ENST00000516735 96 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AL162424.1-201ENST00000602325 221 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AC008739.3-201ENST00000603262 127 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AC240442.1-201ENST00000616055 283 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AC090617.7-201ENST00000623952 126 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AL034408.1-202ENST00000636088 415 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 AC009093.8-201ENST00000641769 292 ntBASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TMEM40Q8WWA1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AL161912.2-201ENST00000565707 3007 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 Y_RNA.353-201ENST00000365440 108 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 SNORD116-18-201ENST00000383961 92 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 RNU6-217P-201ENST00000384164 104 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 MIR199A2-201ENST00000385289 110 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 MIR190B-201ENST00000401119 79 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 CRYBB2P1-203ENST00000415709 538 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 BX679664.1-201ENST00000434429 253 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 HMGB1P37-201ENST00000439613 609 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AC124916.1-201ENST00000444020 547 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AC006026.2-201ENST00000457376 180 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 RPS26P28-201ENST00000470806 348 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 RNU6-1183P-201ENST00000517054 60 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AC090281.1-201ENST00000523019 276 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AC006077.1-201ENST00000604746 343 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 FTX_3.1-201ENST00000610451 147 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AC084757.4-201ENST00000616350 526 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AC097372.5-201ENST00000623665 376 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 AC243829.7-201ENST00000633081 225 ntBASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.22□□□□□ -1.73
TMEM40Q8WWA1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TMEM40Q8WWA1 AC100821.1-201ENST00000523153 2479 ntBASIC4.21□□□□□ -1.73
TMEM40Q8WWA1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TMEM40Q8WWA1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TMEM40Q8WWA1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TMEM40Q8WWA1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
TMEM40Q8WWA1 SNORA63.1-201ENST00000362493 131 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms