Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 Y_RNA.682-201ENST00000516457 100 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 Y_RNA.720-201ENST00000517166 92 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 COPS8P3-201ENST00000526024 482 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 CR383656.8-201ENST00000549046 145 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 AC103996.1-201ENST00000555468 102 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 AC110588.1-201ENST00000559699 137 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 MIR4790-201ENST00000577799 79 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 7SK.7-201ENST00000603504 247 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 AL359757.2-201ENST00000624309 274 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 AC012442.3-202ENST00000636742 206 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 GABRG2-229ENST00000641017 3628 ntBASIC3.3□□□□□ -1.88
KRT78Q8N1N4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.3□□□□□ -1.88
KRT78Q8N1N4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.3□□□□□ -1.88
KRT78Q8N1N4 AL079305.1-201ENST00000623159 3008 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 SNORD116-11-201ENST00000383882 92 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 RNU6-505P-201ENST00000384427 107 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 RNU6-55P-201ENST00000411092 107 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 RNU6-954P-201ENST00000411355 107 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC138623.1-201ENST00000418060 216 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 RBMY2UP-201ENST00000453474 324 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 RNU6-566P-201ENST00000516790 107 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 RNU6-1137P-201ENST00000517073 99 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC034105.4-201ENST00000568304 277 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 U3.45-201ENST00000607547 219 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AL442067.1-201ENST00000613261 223 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC091925.1-201ENST00000623204 462 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC097372.5-201ENST00000623665 376 ntBASIC3.29□□□□□ -1.88
KRT78Q8N1N4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.29□□□□□ -1.88
KRT78Q8N1N4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRT78Q8N1N4 RNU6-428P-201ENST00000362942 107 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 Y_RNA.401-201ENST00000383965 117 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT78Q8N1N4 Z99755.1-201ENST00000414048 380 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC009310.1-201ENST00000414414 451 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AL117339.3-201ENST00000418733 162 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT78Q8N1N4 PMCHL1-202ENST00000423102 261 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 USP9YP16-201ENST00000430287 407 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT78Q8N1N4 USP9YP23-201ENST00000455085 407 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 U8.21-201ENST00000459536 136 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC133134.1-201ENST00000466800 359 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 RPL31P41-201ENST00000477967 372 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC025518.1-201ENST00000479856 347 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC018437.1-201ENST00000492214 406 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 MTCO1P29-201ENST00000496868 288 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT78Q8N1N4 SEM1P1-201ENST00000506694 209 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC110768.1-201ENST00000509222 400 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 MTCYBP40-201ENST00000509390 1135 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 RNA5SP454-201ENST00000517231 127 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 RNU6-794P-201ENST00000517261 64 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT78Q8N1N4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT78Q8N1N4 MIR3149-201ENST00000584629 83 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC009314.1-201ENST00000603871 304 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC019159.1-201ENST00000605094 187 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AL355365.1-201ENST00000616480 294 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC024581.2-201ENST00000619986 252 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 AC058791.1-201ENST00000608412 3198 ntBASIC3.28□□□□□ -1.88
KRT78Q8N1N4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
KRT78Q8N1N4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT78Q8N1N4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRT78Q8N1N4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KRT78Q8N1N4 ZNF519P1-201ENST00000449011 1626 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT78Q8N1N4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.27□□□□□ -1.89
KRT78Q8N1N4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 RNU4-35P-201ENST00000362588 141 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 Y_RNA.301-201ENST00000364990 103 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRT78Q8N1N4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRT78Q8N1N4 Y_RNA.395-201ENST00000383945 109 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 SNORD21-201ENST00000383953 95 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 SNORD17-201ENST00000390930 237 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 RNY4P36-201ENST00000391116 96 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 MTCYBP4-201ENST00000401524 249 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 AL356968.1-201ENST00000416622 474 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 AC074117.2-201ENST00000417130 397 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 ATG3P1-201ENST00000419507 911 ntBASIC3.27□□□□□ -1.89
KRT78Q8N1N4 HMGN2P31-201ENST00000432430 273 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms