Protein–RNA interactions for Protein: Q8IXM3

MRPL41, 39S ribosomal protein L41, mitochondrial, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL41Q8IXM3 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 RNA5SP191-201ENST00000362585 102 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 RNU4-56P-201ENST00000364700 142 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 MIR141-201ENST00000384975 95 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AL357515.1-201ENST00000402967 542 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AL591034.1-201ENST00000407447 340 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 HMGB1P37-201ENST00000439613 609 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 HMGN2P16-201ENST00000456802 261 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AC107626.1-201ENST00000471084 183 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AC091868.1-201ENST00000508746 304 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 Y_RNA.662-201ENST00000516028 97 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 RNU6-1278P-201ENST00000516130 107 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AC233702.2-202ENST00000562547 291 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AL391358.1-201ENST00000605342 190 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AC022441.3-201ENST00000605737 136 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 AL590240.4-201ENST00000616908 390 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.81□□□□□ -1.8
MRPL41Q8IXM3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 Y_RNA.506-201ENST00000384494 102 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 MIR93-201ENST00000385024 80 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 MIR549A-201ENST00000385268 96 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 RPL19P1-201ENST00000411635 428 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AC011753.3-201ENST00000443436 406 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AC073264.2-201ENST00000448886 166 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 RPS26P28-201ENST00000470806 348 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 IGKV1-32-201ENST00000519290 311 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AP006289.1-201ENST00000538089 277 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AC018448.1-201ENST00000552843 316 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AC105137.2-201ENST00000569073 466 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AC025946.2-201ENST00000603398 234 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 MZT1P2-201ENST00000604387 248 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AL162713.1-201ENST00000604480 262 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AC011921.3-201ENST00000605540 361 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 MIR6780A-201ENST00000615089 68 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AP000346.3-201ENST00000622821 210 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 SNORD98-201ENST00000636377 67 ntBASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MRPL41Q8IXM3 AL109809.4-201ENST00000603520 2185 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 RNU6-923P-201ENST00000364753 107 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 RNU6-213P-201ENST00000384051 104 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 RNU6-793P-201ENST00000384233 104 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 RNU6-125P-201ENST00000384505 107 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 AL512633.1-201ENST00000399931 655 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 MIR208B-201ENST00000401172 77 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 MIR320B2-201ENST00000408479 138 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 RNU6-1140P-201ENST00000410517 106 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 AL591419.1-201ENST00000427423 339 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 AC005154.2-201ENST00000438110 379 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 RN7SL459P-201ENST00000481078 302 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 AC074133.1-201ENST00000515696 183 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 RAB9BP1-201ENST00000519581 626 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 AC069240.1-201ENST00000548774 375 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 AC133555.2-201ENST00000550213 292 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 CYP4A27P-201ENST00000567218 190 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 HSPE1P7-201ENST00000604681 321 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 MIR6076-201ENST00000617521 113 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 AC073349.3-201ENST00000617616 186 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 AF117829.1-206ENST00000621883 3802 ntBASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MRPL41Q8IXM3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.78□□□□□ -1.8
MRPL41Q8IXM3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.78□□□□□ -1.8
MRPL41Q8IXM3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms