Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 SNORA31.19-201ENST00000517079 126 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 TRAV8-5-201ENST00000537369 341 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 AC233702.9-201ENST00000581528 203 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 AC015813.4-201ENST00000610469 179 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 AC012640.5-201ENST00000623897 319 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 MIR492-201ENST00000638676 116 ntBASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
NPAS3Q8IXF0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
NPAS3Q8IXF0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPAS3Q8IXF0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NPAS3Q8IXF0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.65□□□□□ -1.66
NPAS3Q8IXF0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
NPAS3Q8IXF0 AC022893.2-201ENST00000564832 3296 ntBASIC4.65□□□□□ -1.66
NPAS3Q8IXF0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
NPAS3Q8IXF0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NPAS3Q8IXF0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 RNY1P10-201ENST00000363268 113 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 UBBP2-201ENST00000376781 231 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 RNU6-356P-201ENST00000384140 107 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 RNU6-1310P-201ENST00000384153 107 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 SNORA48.7-201ENST00000391302 135 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 RNA5SP475-201ENST00000410568 110 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AL359073.1-201ENST00000448036 403 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AC092798.1-201ENST00000458542 409 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AC087588.1-201ENST00000462203 316 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AL355812.1-201ENST00000603215 216 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AC074140.1-201ENST00000621617 208 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AC097461.1-201ENST00000568928 2821 ntBASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
NPAS3Q8IXF0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 MIR331-201ENST00000362302 94 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 Y_RNA.120-201ENST00000363304 110 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 RNU6-1205P-201ENST00000363625 106 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 RNU6-137P-201ENST00000363680 108 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 Y_RNA.179-201ENST00000363844 90 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 RNU6-647P-201ENST00000364243 107 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 Y_RNA.281-201ENST00000364774 94 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 MIR526A2-201ENST00000390198 65 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 AL513331.1-201ENST00000411908 397 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 RPL12P46-201ENST00000436610 195 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 BX276092.4-201ENST00000452056 248 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 snoU13.6-201ENST00000458785 104 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 RN7SKP46-201ENST00000515942 234 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 RNU6-1198P-201ENST00000516904 67 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 AC091178.2-201ENST00000584401 117 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 uc_338.13-201ENST00000618243 179 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 MIR3674-201ENST00000636576 68 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 DHX9P1-201ENST00000436565 3076 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 NEAT1-202ENST00000501122 22743 ntBASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.64□□□□□ -1.67
NPAS3Q8IXF0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 RNU6-727P-201ENST00000363592 107 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 RN7SKP280-201ENST00000364196 304 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 RNU6-1134P-201ENST00000365156 101 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 RNU6-597P-201ENST00000365620 102 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 SNORA36C-201ENST00000384289 132 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 SNORA72-201ENST00000384339 132 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 MIR549A-201ENST00000385268 96 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 SNORD12C-201ENST00000386307 89 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 AL355497.1-201ENST00000406262 551 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 NDUFS5P4-201ENST00000412983 318 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 AL358075.3-201ENST00000426289 226 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 AL354710.1-201ENST00000453641 246 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 AC139453.3-201ENST00000493276 369 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 UBE2CP3-201ENST00000502715 450 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 RNU6-109P-201ENST00000516364 107 ntBASIC4.63□□□□□ -1.67
NPAS3Q8IXF0 RNU6-184P-201ENST00000516514 107 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms