| CNTN4 | Q8IWV2 | AC106892.1-201 | ENST00000491608 | 406 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | HYDIN2-201 | ENST00000493714 | 554 nt | TSL 4 BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MTCYBP40-201 | ENST00000509390 | 1135 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC016556.1-201 | ENST00000510004 | 935 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | SNORA4.4-201 | ENST00000515921 | 135 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU2-19P-201 | ENST00000517288 | 84 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC012414.6-201 | ENST00000568241 | 401 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC019183.1-201 | ENST00000580524 | 505 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MIR3941-201 | ENST00000582572 | 103 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MIR5002-201 | ENST00000584713 | 97 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC073539.2-201 | ENST00000597113 | 165 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL031274.2-201 | ENST00000599419 | 203 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL590229.1-201 | ENST00000603497 | 542 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | ELOCP5-201 | ENST00000604924 | 333 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MIR6715A-201 | ENST00000615929 | 79 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC078883.4-201 | ENST00000623218 | 367 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC120349.3-201 | ENST00000624377 | 529 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC090517.3-201 | ENST00000625170 | 141 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | SAMD9L-201 | ENST00000318238 | 7134 nt | APPRIS P1 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | CFHR4-204 | ENST00000608469 | 1601 nt | TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | CUL2-206 | ENST00000421317 | 2376 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | KNL1-204 | ENST00000527044 | 5404 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC008555.8-201 | ENST00000623602 | 2168 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | PDCL2-201 | ENST00000295645 | 861 nt | APPRIS P1 TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | OR5AK2-201 | ENST00000326855 | 996 nt | APPRIS P1 BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-78P-201 | ENST00000362897 | 107 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-527P-201 | ENST00000363425 | 104 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-606P-201 | ENST00000384721 | 111 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU2-3P-201 | ENST00000410144 | 191 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-1140P-201 | ENST00000410517 | 106 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | LINC00368-201 | ENST00000422994 | 650 nt | TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | USP9YP18-201 | ENST00000425912 | 695 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | NFIA-AS1-201 | ENST00000442027 | 384 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC069542.1-201 | ENST00000445235 | 557 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MTND1P18-201 | ENST00000448191 | 573 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC245102.2-201 | ENST00000448956 | 180 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MTCO3P28-201 | ENST00000513351 | 515 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC106744.2-201 | ENST00000513955 | 898 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNA5SP281-201 | ENST00000516504 | 135 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-1178P-201 | ENST00000516674 | 107 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | LINC02545-201 | ENST00000525381 | 306 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC090023.1-201 | ENST00000545750 | 443 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC084879.2-201 | ENST00000551656 | 369 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MIR3913-1-201 | ENST00000577744 | 102 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC008088.1-201 | ENST00000580993 | 280 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MIR5694-201 | ENST00000581190 | 76 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL589765.7-201 | ENST00000601684 | 629 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL136363.2-201 | ENST00000604173 | 851 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC121247.2-201 | ENST00000604776 | 136 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | C8orf59-212 | ENST00000615697 | 483 nt | APPRIS P1 TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL031601.2-202 | ENST00000622650 | 282 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | SENP7-206 | ENST00000394094 | 4703 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | SLITRK6-201 | ENST00000400286 | 4318 nt | APPRIS P1 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | LINC01938-201 | ENST00000521341 | 1864 nt | TSL 2 BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNA5SP289-201 | ENST00000362332 | 137 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-1032P-201 | ENST00000384100 | 107 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-1029P-201 | ENST00000384109 | 107 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | Y_RNA.480-201 | ENST00000384364 | 102 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MIR1-2-201 | ENST00000384961 | 85 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC002456.1-201 | ENST00000415965 | 317 nt | TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL590556.1-201 | ENST00000423231 | 483 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL451060.1-203 | ENST00000431307 | 362 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC079448.1-201 | ENST00000449377 | 373 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC055731.1-201 | ENST00000474387 | 401 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MTND2P33-201 | ENST00000506452 | 1031 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MTCO3P9-201 | ENST00000506989 | 781 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC109479.2-201 | ENST00000517842 | 174 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC145141.2-201 | ENST00000518473 | 501 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | IL7-206 | ENST00000520269 | 456 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AF117829.1-203 | ENST00000520306 | 421 nt | TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC022695.3-201 | ENST00000523385 | 478 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC139497.1-201 | ENST00000524042 | 501 nt | TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AP001893.2-201 | ENST00000526949 | 202 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC115990.1-201 | ENST00000526957 | 301 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AP002963.1-201 | ENST00000530590 | 184 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | Z69720.2-201 | ENST00000624755 | 279 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | CCDC30-201 | ENST00000340612 | 2664 nt | APPRIS P2 TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | TRIQK-204 | ENST00000517858 | 1882 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-1159P-201 | ENST00000362933 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-181P-201 | ENST00000363225 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | Y_RNA.324-201 | ENST00000365165 | 102 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-715P-201 | ENST00000365204 | 103 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-546P-201 | ENST00000383991 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-434P-201 | ENST00000384376 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | MIR144-201 | ENST00000384886 | 86 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | HMGN2P39-201 | ENST00000398005 | 273 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL591034.2-201 | ENST00000402839 | 359 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL445123.1-201 | ENST00000422023 | 446 nt | TSL 2 BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL118520.1-201 | ENST00000450770 | 291 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AL137159.1-201 | ENST00000452808 | 512 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | PCDH9-AS4-201 | ENST00000456459 | 436 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | BET1P1-201 | ENST00000482276 | 359 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | ODF2L-216 | ENST00000486215 | 311 nt | TSL 2 BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RPL30P1-201 | ENST00000488676 | 339 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | SMAD1-AS2-201 | ENST00000508936 | 1090 nt | TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC097460.1-201 | ENST00000514624 | 590 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC004054.1-201 | ENST00000515111 | 270 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | SCARNA16.3-201 | ENST00000516595 | 184 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | RNU6-445P-201 | ENST00000516949 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CNTN4 | Q8IWV2 | AC021785.1-201 | ENST00000520780 | 453 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |