Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL596276.1-201ENST00000434465 418 ntBASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AC244505.5-201ENST00000443639 207 ntBASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.98□□□□□ -2.09
NIPAL3Q6P499 MTND2P4-201ENST00000445034 1004 ntBASIC1.98□□□□□ -2.09
NIPAL3Q6P499 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.98□□□□□ -2.09
NIPAL3Q6P499 MTCO3P28-201ENST00000513351 515 ntBASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AP002770.2-201ENST00000543613 532 ntBASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AC121758.2-201ENST00000553271 193 ntBASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AC233702.2-202ENST00000562547 291 ntBASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AC008945.2-201ENST00000606056 604 ntBASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AC009090.3-201ENST00000616553 565 ntBASIC1.98□□□□□ -2.09
NIPAL3Q6P499 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.98□□□□□ -2.09
NIPAL3Q6P499 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.98□□□□□ -2.09
NIPAL3Q6P499 Y_RNA.40-201ENST00000362645 93 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 RNU6-715P-201ENST00000365204 103 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 RNU6-1029P-201ENST00000384109 107 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 RNU6-1274P-201ENST00000384557 107 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 HMGN2P39-201ENST00000398005 273 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 RNU4-46P-201ENST00000410818 138 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 CYCSP33-201ENST00000414485 327 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 AL139413.1-201ENST00000421309 217 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 PIGFP2-201ENST00000421400 651 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 USP9YP8-201ENST00000441913 500 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 AC079448.1-201ENST00000449377 373 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.97□□□□□ -2.09
NIPAL3Q6P499 RPS29P15-201ENST00000458329 171 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 snoU13.14-201ENST00000459372 104 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 AC090255.1-201ENST00000495779 349 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 MTCYBP40-201ENST00000509390 1135 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 AC010486.1-201ENST00000511793 424 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 RNU6-667P-201ENST00000517186 102 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 AP000763.2-201ENST00000540641 163 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 NDUFA5P6-201ENST00000542110 379 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 AL512310.1-201ENST00000548639 172 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 SNORD53-201ENST00000579969 78 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 SNRPGP17-201ENST00000603780 214 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 AL031601.2-202ENST00000622650 282 ntBASIC1.97□□□□□ -2.09
NIPAL3Q6P499 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 RNU6-282P-201ENST00000365357 103 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 RNU4-48P-201ENST00000365559 182 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 RNU2-32P-201ENST00000411193 191 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 KATNBL1P3-201ENST00000443475 909 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 AC009063.1-201ENST00000563342 702 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 MIR6840-201ENST00000611937 71 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 AC072046.2-201ENST00000618366 268 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 uc_338.11-201ENST00000619132 160 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 Z69720.2-201ENST00000624755 279 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 AP000553.5-201ENST00000641933 54 ntBASIC1.96□□□□□ -2.1
NIPAL3Q6P499 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.96□□□□□ -2.1
NIPAL3Q6P499 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AL390237.1-201ENST00000404226 1415 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 RNU6-181P-201ENST00000363225 107 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 Y_RNA.324-201ENST00000365165 102 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 RNU6-546P-201ENST00000383991 107 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 SNORA51.11-201ENST00000384442 131 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 MIR17-201ENST00000385012 84 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 MIR29B2-201ENST00000385055 81 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AL445529.1-201ENST00000398713 389 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 RN7SKP142-201ENST00000411236 328 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 MTND1P23-201ENST00000416931 372 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 GPM6BP3-201ENST00000442797 145 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 RPL39P29-201ENST00000447779 157 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AL137159.1-201ENST00000452808 512 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 BET1P1-201ENST00000482276 359 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 HMGB1P35-201ENST00000503360 598 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 RNU6-445P-201ENST00000516949 107 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 RN7SKP256-201ENST00000517201 314 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 MIR4287-201ENST00000579398 78 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 MIR5002-201ENST00000584713 97 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AC040904.1-201ENST00000590850 223 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.95□□□□□ -2.1
NIPAL3Q6P499 AL590808.1-201ENST00000618696 141 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms