Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 RNU4-35P-201ENST00000362588 141 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 RNA5SP167-201ENST00000365461 116 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.458-201ENST00000384240 102 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 U3.37-201ENST00000408528 213 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 RPL21P66-201ENST00000426566 466 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 AL590664.1-201ENST00000448065 339 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 MTATP6P7-201ENST00000453315 681 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 AL049873.1-201ENST00000480540 376 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 RPL30P5-201ENST00000494923 336 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.700-201ENST00000516806 100 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 RNU6-570P-201ENST00000517051 105 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 AC006557.5-201ENST00000603126 811 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 YPEL5P2-201ENST00000605553 359 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 MIR8057-201ENST00000620957 69 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 U6.99-201ENST00000637524 83 ntBASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.20-201ENST00000362479 113 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.123-201ENST00000363338 102 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RNU4-9P-201ENST00000364951 139 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.405-201ENST00000383979 100 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.416-201ENST00000384014 113 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RNU6-209P-201ENST00000384118 107 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.451-201ENST00000384200 100 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.524-201ENST00000384564 100 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.561-201ENST00000384694 100 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RPL21P75-201ENST00000396599 483 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RPL21P28-201ENST00000401418 483 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 HLFP1-201ENST00000402375 499 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RNU2-25P-201ENST00000411041 191 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RNU6-130P-201ENST00000411112 103 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RNA5SP31-201ENST00000411144 127 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AL590556.1-201ENST00000423231 483 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 BX679664.1-201ENST00000434429 253 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AC004383.1-201ENST00000438135 289 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AP001486.1-201ENST00000463339 476 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RPL21P39-201ENST00000463605 483 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AC087190.1-201ENST00000484462 480 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AC107032.1-201ENST00000485945 480 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AC132942.1-201ENST00000486753 483 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AC093591.1-201ENST00000491435 481 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RPS23P5-201ENST00000495419 428 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 RPL21P16-201ENST00000495531 483 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AP004607.1-201ENST00000524456 203 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AP002770.2-201ENST00000543613 532 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 AC024153.1-201ENST00000603103 365 ntBASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
USPL1Q5W0Q7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
USPL1Q5W0Q7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 Y_RNA.439-201ENST00000384119 94 ntBASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 RNU6-140P-201ENST00000384566 108 ntBASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 RNU6-1203P-201ENST00000410703 110 ntBASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 ANXA2P1-201ENST00000505539 926 ntBASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 RN7SKP40-201ENST00000517211 242 ntBASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 AC060766.3-201ENST00000591442 263 ntBASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 AC098479.1-201ENST00000609225 154 ntBASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 AC090617.7-201ENST00000623952 126 ntBASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.58□□□□□ -1.68
USPL1Q5W0Q7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 SNORA31-201ENST00000362607 130 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 SNORD81.1-201ENST00000363064 77 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 RNU6-105P-201ENST00000363909 104 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 SNORA38.1-201ENST00000364172 131 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 Y_RNA.358-201ENST00000365491 99 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 RNU6-1197P-201ENST00000391183 107 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 HMGN2P8-201ENST00000391458 268 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 RNU6-121P-201ENST00000410525 99 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 MTCO3P29-201ENST00000432119 779 ntBASIC4.57□□□□□ -1.68
USPL1Q5W0Q7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms