Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 GABRG2-229ENST00000641017 3628 ntBASIC2.13□□□□□ -2.07
LCE4AQ5TA78 HNRNPA1P54-201ENST00000411857 9714 ntBASIC2.13□□□□□ -2.07
LCE4AQ5TA78 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 UG0898H09-202ENST00000623646 7040 ntBASIC2.13□□□□□ -2.07
LCE4AQ5TA78 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 AC108099.1-201ENST00000564402 3258 ntBASIC2.13□□□□□ -2.07
LCE4AQ5TA78 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC2.13□□□□□ -2.07
LCE4AQ5TA78 AC092435.4-201ENST00000623012 4159 ntBASIC2.13□□□□□ -2.07
LCE4AQ5TA78 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 DMD-202ENST00000343523 5623 ntTSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 RNU6-664P-201ENST00000362381 107 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 RNA5SP477-201ENST00000362639 119 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 Y_RNA.119-201ENST00000363301 96 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 SNORA38B-201ENST00000363524 131 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 RNA5SP322-201ENST00000363617 119 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 RNA5SP132-201ENST00000364725 118 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 MIR607-201ENST00000385241 96 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 SNORA11.4-201ENST00000408823 129 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 RN7SKP271-201ENST00000410528 320 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 AC064862.4-201ENST00000442180 334 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 HMGN2P21-201ENST00000447764 270 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 SNORD123-201ENST00000459473 70 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 RNA5SP362-201ENST00000516048 118 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 RNA5SP360-201ENST00000516555 118 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 AC140063.1-201ENST00000541343 259 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 AC209154.1-201ENST00000582156 337 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 MIR7155-201ENST00000615925 56 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 U6.109-201ENST00000636749 87 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 SPATA31B1P-201ENST00000434692 4016 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 AC010329.1-201ENST00000593903 8328 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 Z83843.1-201ENST00000604070 3685 ntBASIC2.12□□□□□ -2.07
LCE4AQ5TA78 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LCE4AQ5TA78 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms