Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC38Q502W7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC38Q502W7 AC073325.2-201ENST00000339545 159 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 RNU6-486P-201ENST00000363116 107 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 RNU6-254P-201ENST00000363377 107 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 RNU6-461P-201ENST00000364195 107 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC38Q502W7 MIR450B-201ENST00000401182 78 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC38Q502W7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC38Q502W7 AC006028.1-201ENST00000438379 402 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 AL359672.1-201ENST00000442302 409 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 AP000852.1-201ENST00000472460 573 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC38Q502W7 RPL23AP70-201ENST00000483361 460 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 AC018437.1-201ENST00000492214 406 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 AC025423.5-201ENST00000550230 219 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC38Q502W7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC38Q502W7 VN1R107P-201ENST00000601784 209 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC38Q502W7 CTHRC1P1-201ENST00000605383 469 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CCDC38Q502W7 AC244517.12-201ENST00000623581 663 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 MIR3651-201ENST00000630427 90 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 MIR622-201ENST00000638396 96 ntBASIC3.09□□□□□ -1.91
CCDC38Q502W7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.92
CCDC38Q502W7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.09□□□□□ -1.92
CCDC38Q502W7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC38Q502W7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC38Q502W7 SNORD114-19-201ENST00000363072 75 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 RNU6-827P-201ENST00000365553 106 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 SET-203ENST00000372688 801 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC38Q502W7 RNU6-1106P-201ENST00000390845 107 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 AL162578.1-201ENST00000406202 378 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 AC097463.2-201ENST00000421074 142 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC38Q502W7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC38Q502W7 UBBP3-201ENST00000445497 241 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 AC112771.1-201ENST00000463581 102 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 RN7SL807P-201ENST00000470923 297 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 SNORA31.18-201ENST00000517043 134 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 RNU6-1314P-201ENST00000517139 104 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 CKS1BP7-201ENST00000522230 235 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 AP005597.4-201ENST00000526762 229 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC38Q502W7 AC090897.2-201ENST00000581715 130 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 MIR3616-201ENST00000584070 92 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC38Q502W7 AC080128.1-201ENST00000474389 1917 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC38Q502W7 MAPK10-266ENST00000641066 6555 ntBASIC3.08□□□□□ -1.92
CCDC38Q502W7 Z75746.1-201ENST00000440243 2080 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC38Q502W7 AL035425.3-201ENST00000564206 4996 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 RNU6-1010P-201ENST00000362757 107 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 RNU6-428P-201ENST00000362942 107 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 RNU6-336P-201ENST00000364891 107 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 Y_RNA.414-201ENST00000384011 101 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 RNU6-214P-201ENST00000384130 107 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 RPS29P13-201ENST00000402041 169 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 RNU4-47P-201ENST00000410876 114 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 Z92545.1-201ENST00000411782 234 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 AC138623.1-201ENST00000418060 216 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 AC007969.2-201ENST00000441891 191 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 MTCO2P3-201ENST00000442543 421 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC38Q502W7 AC124916.1-201ENST00000444020 547 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 RNU7-66P-201ENST00000459469 62 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 RPL31P58-201ENST00000469001 379 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 AF213884.2-201ENST00000510417 903 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 SCARNA3-201ENST00000517097 143 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 RN7SKP57-201ENST00000517248 293 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC38Q502W7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC38Q502W7 HSPE1P20-201ENST00000538133 289 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC38Q502W7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC38Q502W7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC38Q502W7 AC100830.2-201ENST00000581636 240 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 AC018638.8-201ENST00000588755 281 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 BNIP3P16-201ENST00000589779 534 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 BNIP3P10-201ENST00000605360 577 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC38Q502W7 FAM157A-202ENST00000615155 405 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 AC024581.2-201ENST00000619986 252 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 AC007318.2-201ENST00000620999 243 ntBASIC3.07□□□□□ -1.92
CCDC38Q502W7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC38Q502W7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC38Q502W7 RNU6-1180P-201ENST00000364935 107 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 RNU6-1329P-201ENST00000365664 107 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 RNU6-128P-201ENST00000383976 107 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 SNORD73A-201ENST00000386062 65 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 FO393413.1-201ENST00000402892 195 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 RNU6-1245P-201ENST00000411130 106 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 RNA5SP492-201ENST00000411330 114 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 RPL30P16-201ENST00000419341 429 ntBASIC3.06□□□□□ -1.92
CCDC38Q502W7 NUP35P1-201ENST00000422734 947 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms