Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 MIR1248-201ENST00000629190 106 ntBASIC0.4□□□□□ -2.35
CCDC58Q4VC31 RNU6-223P-201ENST00000362830 107 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 RNU6-655P-201ENST00000362858 107 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 SNORD56.4-201ENST00000363883 71 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 RNU6-512P-201ENST00000364438 103 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 RNU1-93P-201ENST00000364704 169 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 RNU6-17P-201ENST00000384245 107 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 RNU6-18P-201ENST00000384527 107 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 MIR194-1-201ENST00000384892 85 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 MIR29B2-201ENST00000385055 81 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 SNORD65C-201ENST00000390962 71 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 AL031577.2-201ENST00000404133 280 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 Y_RNA.595-201ENST00000410403 105 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.39□□□□□ -2.35
CCDC58Q4VC31 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.39□□□□□ -2.35
CCDC58Q4VC31 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC58Q4VC31 RPS27AP8-201ENST00000452665 445 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 MTND2P6-201ENST00000455337 1030 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 AC005840.1-201ENST00000498412 377 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC58Q4VC31 RNU5A-4P-201ENST00000516588 111 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 RNU6-714P-201ENST00000516963 103 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.39□□□□□ -2.35
CCDC58Q4VC31 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC58Q4VC31 AC093012.1-202ENST00000549403 582 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 BNIP3P31-201ENST00000604515 566 ntBASIC0.39□□□□□ -2.35
CCDC58Q4VC31 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.39□□□□□ -2.35
CCDC58Q4VC31 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC58Q4VC31 MIR96-201ENST00000362288 78 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 RNU6-1066P-201ENST00000363573 105 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 SNORD51.1-201ENST00000365405 77 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 FTH1P15-201ENST00000406984 280 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 RNU2-7P-201ENST00000410794 178 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 MTND1P21-201ENST00000412991 285 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC58Q4VC31 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.38□□□□□ -2.35
CCDC58Q4VC31 AC063976.4-201ENST00000421971 163 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC58Q4VC31 MTATP6P30-201ENST00000443540 664 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 MTCO2P25-201ENST00000447065 681 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC58Q4VC31 BTF3P15-201ENST00000455606 336 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 RNU1-131P-201ENST00000458943 161 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.38□□□□□ -2.35
CCDC58Q4VC31 AF131216.2-201ENST00000512316 564 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC58Q4VC31 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC58Q4VC31 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CCDC58Q4VC31 AC136618.2-201ENST00000575091 400 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 MIR4498-201ENST00000577599 66 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC58Q4VC31 AC107304.1-201ENST00000604229 296 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.38□□□□□ -2.35
CCDC58Q4VC31 AC123767.1-202ENST00000620407 817 ntBASIC0.38□□□□□ -2.35
CCDC58Q4VC31 MIR200A-201ENST00000384875 90 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 AL356776.1-201ENST00000406574 447 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.37□□□□□ -2.35
CCDC58Q4VC31 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.37□□□□□ -2.35
CCDC58Q4VC31 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.37□□□□□ -2.35
CCDC58Q4VC31 AC097473.1-201ENST00000508142 408 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 RNU6-390P-201ENST00000516259 103 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 RNA5SP481-201ENST00000516814 122 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 RNA5SP102-201ENST00000516865 106 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.37□□□□□ -2.35
CCDC58Q4VC31 AC025423.5-201ENST00000550230 219 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 HSPE1P4-201ENST00000550617 308 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.37□□□□□ -2.35
CCDC58Q4VC31 VN1R82P-201ENST00000601481 356 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 AC090578.1-201ENST00000604955 591 ntBASIC0.37□□□□□ -2.35
CCDC58Q4VC31 AC245060.5-201ENST00000610778 3293 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 LINC02555-201ENST00000563933 1951 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 RNU6-1210P-201ENST00000363775 107 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 CBX3P9-201ENST00000402326 552 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 RNU6-321P-201ENST00000410912 106 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 BX119904.4-201ENST00000424402 301 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 CETN4P-201ENST00000432407 469 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 AC092628.1-201ENST00000436250 252 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC58Q4VC31 AC137800.2-201ENST00000574375 120 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 DPPA3P3-201ENST00000603842 430 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 RMST_4.1-201ENST00000616886 107 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 MIR1322-201ENST00000638013 71 ntBASIC0.36□□□□□ -2.35
CCDC58Q4VC31 RNY1P10-201ENST00000363268 113 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms