Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 MTND4P4-201ENST00000439033 1366 ntBASIC1.72□□□□□ -2.13
CDH17Q12864 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDH17Q12864 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDH17Q12864 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CDH17Q12864 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH17Q12864 MIR412-201ENST00000362142 91 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 SNORD114-19-201ENST00000363072 75 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 RNU6-553P-201ENST00000364047 96 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 SNORD14B-201ENST00000364533 90 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 SNORA24.1-201ENST00000384401 135 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 RPS3AP36-201ENST00000398190 775 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AL591034.2-201ENST00000402839 359 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 MIR1289-2-201ENST00000408360 111 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 Y_RNA.598-201ENST00000410480 95 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 RNU2-39P-201ENST00000410604 198 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.71□□□□□ -2.14
CDH17Q12864 MTND4P20-201ENST00000424125 869 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 MED13P1-201ENST00000428342 171 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 NDUFB1P2-201ENST00000449477 176 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 snoU109.2-201ENST00000459316 135 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 snoU13.15-201ENST00000459407 104 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 RAP1BP2-201ENST00000478270 544 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH17Q12864 RPL23AP63-201ENST00000498752 471 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AC108210.2-201ENST00000503681 201 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH17Q12864 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.71□□□□□ -2.14
CDH17Q12864 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.71□□□□□ -2.14
CDH17Q12864 RNU6-759P-201ENST00000516740 103 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 RNU2-46P-201ENST00000517038 113 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AC106038.2-201ENST00000520706 568 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.71□□□□□ -2.14
CDH17Q12864 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH17Q12864 MIR548AB-201ENST00000584917 84 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 BNIP3P30-201ENST00000601184 574 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 ELOCP5-201ENST00000604924 333 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 NDUFA8P1-201ENST00000605525 367 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AC092354.1-201ENST00000606057 376 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AC025754.2-201ENST00000606491 432 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AL139286.2-201ENST00000606838 396 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH17Q12864 AL360219.1-201ENST00000610230 366 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 AC092656.1-203ENST00000624134 423 ntBASIC1.71□□□□□ -2.14
CDH17Q12864 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CDH17Q12864 RBBP8P1-201ENST00000449447 1844 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CDH17Q12864 RNU1-23P-201ENST00000363361 144 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 RNU6-641P-201ENST00000384006 107 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 SNORA8-201ENST00000384574 139 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 RNA5SP212-201ENST00000391223 107 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CDH17Q12864 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CDH17Q12864 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH17Q12864 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 AL627311.1-201ENST00000431514 115 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH17Q12864 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.7□□□□□ -2.14
CDH17Q12864 PPP1R2P5-201ENST00000457256 603 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 BZW1P2-201ENST00000473537 826 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 MTCYBP35-201ENST00000503630 1137 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 AC117522.1-201ENST00000509821 380 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 MTND1P22-201ENST00000510572 951 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 RNU6-237P-201ENST00000515985 71 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH17Q12864 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.7□□□□□ -2.14
CDH17Q12864 AK6P1-201ENST00000540219 478 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.7□□□□□ -2.14
CDH17Q12864 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH17Q12864 AC136619.2-201ENST00000563361 631 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 MTATP6P24-201ENST00000576835 677 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.7□□□□□ -2.14
CDH17Q12864 RPL30P11-203ENST00000598995 310 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 AL078605.1-201ENST00000603529 500 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 AL138889.2-201ENST00000603883 242 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 AC093788.1-201ENST00000609356 927 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 MIR6845-201ENST00000613182 61 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 AC122133.1-201ENST00000613964 233 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.7□□□□□ -2.14
CDH17Q12864 AL356292.1-201ENST00000283110 373 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 RNU6-169P-201ENST00000365336 107 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 RNU6-61P-201ENST00000365528 109 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDH17Q12864 RNU6-1032P-201ENST00000384100 107 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 RNU6-72P-201ENST00000384285 79 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 MIR578-201ENST00000384828 96 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 MIR10A-201ENST00000385043 110 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 RPS20P15-201ENST00000412792 311 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.69□□□□□ -2.14
CDH17Q12864 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.69□□□□□ -2.14
CDH17Q12864 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.69□□□□□ -2.14
CDH17Q12864 AC104850.1-201ENST00000435940 476 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 MTND2P29-201ENST00000438595 412 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH17Q12864 RBBP4P6-201ENST00000508098 202 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH17Q12864 SCARNA24.1-201ENST00000516465 137 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 RNU6-586P-201ENST00000517265 104 ntBASIC1.69□□□□□ -2.14
CDH17Q12864 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH17Q12864 MIR548AC-201ENST00000585049 88 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms