Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 SNORA48.11-201ENST00000517015 89 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 AC118273.2-201ENST00000532092 465 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 CYCSP26-201ENST00000534107 320 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB40BQ12829 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB40BQ12829 AL391840.1-201ENST00000571144 367 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.93□□□□□ -2.1
RAB40BQ12829 MIR4703-201ENST00000577728 79 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 RMST_7.1-201ENST00000621935 268 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 AC097520.1-201ENST00000624435 385 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 CTSLP2-204ENST00000629029 392 ntBASIC1.93□□□□□ -2.1
RAB40BQ12829 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RAB40BQ12829 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.92□□□□□ -2.1
RAB40BQ12829 RNU6-212P-201ENST00000362642 104 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 RNU6-655P-201ENST00000362858 107 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 RNU4-52P-201ENST00000384209 138 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 RNY3P9-201ENST00000384727 106 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AL591034.2-201ENST00000402839 359 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 RNA5SP390-201ENST00000410191 113 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 RNU2-9P-201ENST00000410194 145 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 RNU2-23P-201ENST00000410545 195 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 CYCSP33-201ENST00000414485 327 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.92□□□□□ -2.1
RAB40BQ12829 AL669831.1-202ENST00000428504 417 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.92□□□□□ -2.1
RAB40BQ12829 GTF2IP13-201ENST00000438487 386 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AL118520.1-201ENST00000450770 291 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB40BQ12829 RN7SL636P-201ENST00000497504 294 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB40BQ12829 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB40BQ12829 AC010486.1-201ENST00000511793 424 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB40BQ12829 RNU7-193P-201ENST00000516723 65 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 RNU6-586P-201ENST00000517265 104 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 MTCO2P4-201ENST00000517968 247 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.92□□□□□ -2.1
RAB40BQ12829 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB40BQ12829 AP002770.2-201ENST00000543613 532 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 MIR3126-201ENST00000577443 74 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 MIR4528-201ENST00000577763 90 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AC002984.1-201ENST00000591692 448 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AC009314.1-201ENST00000603871 304 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AL161423.1-201ENST00000613700 262 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 uc_338.11-201ENST00000619132 160 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AL031601.2-202ENST00000622650 282 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 AC012640.5-201ENST00000623897 319 ntBASIC1.92□□□□□ -2.1
RAB40BQ12829 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.92□□□□□ -2.1
RAB40BQ12829 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAB40BQ12829 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
RAB40BQ12829 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RAB40BQ12829 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RAB40BQ12829 RNU6-529P-201ENST00000363383 104 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAB40BQ12829 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAB40BQ12829 RNU6-606P-201ENST00000384721 111 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 MIR561-201ENST00000385216 97 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB40BQ12829 MTCO2P11-201ENST00000431069 680 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB40BQ12829 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.91□□□□□ -2.1
RAB40BQ12829 AC132479.1-201ENST00000449160 144 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 RPL23AP49-201ENST00000492925 468 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB40BQ12829 AP000873.5-201ENST00000533906 236 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.91□□□□□ -2.1
RAB40BQ12829 IMMP1LP2-201ENST00000552954 492 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 MIR5694-201ENST00000581190 76 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB40BQ12829 AL670379.2-201ENST00000604983 252 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 AC008536.2-201ENST00000607284 349 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 DUXAP9-208ENST00000622815 614 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 AC090517.3-201ENST00000625170 141 ntBASIC1.91□□□□□ -2.1
RAB40BQ12829 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
RAB40BQ12829 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.9□□□□□ -2.1
RAB40BQ12829 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
RAB40BQ12829 RNU1-23P-201ENST00000363361 144 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 U3.12-201ENST00000364498 214 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 RNU6-1303P-201ENST00000364841 107 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 Y_RNA.324-201ENST00000365165 102 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 SNORA6-201ENST00000384033 151 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.9□□□□□ -2.11
RAB40BQ12829 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.9□□□□□ -2.11
RAB40BQ12829 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.9□□□□□ -2.11
RAB40BQ12829 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.9□□□□□ -2.11
RAB40BQ12829 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.9□□□□□ -2.11
RAB40BQ12829 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.9□□□□□ -2.11
RAB40BQ12829 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 RPL30P12-201ENST00000474666 353 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 AL121594.1-201ENST00000475906 575 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 AC092436.1-201ENST00000506450 503 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 MTCYBP40-201ENST00000509390 1135 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 SNORA4.4-201ENST00000515921 135 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 SCARNA16.3-201ENST00000516595 184 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.9□□□□□ -2.11
RAB40BQ12829 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.9□□□□□ -2.11
RAB40BQ12829 RPS3AP23-202ENST00000574601 686 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms