Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 NDUFA5P4-201ENST00000436704 385 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 HMGN2P5-201ENST00000436882 273 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 MTCYBP6-201ENST00000441810 138 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 MRPL50P4-201ENST00000446432 475 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 AL353705.4-201ENST00000449661 238 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.17□□□□□ -1.9
DDR1Q08345 AL162395.1-201ENST00000457882 422 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 RNU6-333P-201ENST00000459117 107 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.17□□□□□ -1.9
DDR1Q08345 AC087588.1-201ENST00000462203 316 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 HMGN2P26-201ENST00000463169 339 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 AL135752.1-201ENST00000479477 471 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 AC108078.2-201ENST00000510750 236 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.17□□□□□ -1.9
DDR1Q08345 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.17□□□□□ -1.9
DDR1Q08345 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.17□□□□□ -1.9
DDR1Q08345 AC008521.1-201ENST00000587471 187 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 AC174048.1-201ENST00000603389 144 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 AC130324.3-201ENST00000614165 542 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 AL160413.1-201ENST00000622780 310 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 AC090617.7-201ENST00000623952 126 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 OR4G1P-203ENST00000641984 1631 ntBASIC3.17□□□□□ -1.9
DDR1Q08345 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDR1Q08345 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
DDR1Q08345 ZNF519P1-201ENST00000449011 1626 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDR1Q08345 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDR1Q08345 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.16□□□□□ -1.9
DDR1Q08345 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDR1Q08345 RNU6-845P-201ENST00000362578 103 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 Y_RNA.67-201ENST00000362870 100 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 RNU6-1148P-201ENST00000410992 104 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 AL135786.1-201ENST00000415892 214 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.16□□□□□ -1.9
DDR1Q08345 MTCO2P12-201ENST00000427426 682 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 AC005534.2-201ENST00000431047 433 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 MTND3P16-201ENST00000452205 344 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 AC233279.1-201ENST00000455300 423 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.16□□□□□ -1.9
DDR1Q08345 AC234781.5-201ENST00000508429 271 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 RNU6-826P-201ENST00000516827 104 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 RNU6-928P-201ENST00000516876 104 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 RNA5SP503-201ENST00000517047 117 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.16□□□□□ -1.9
DDR1Q08345 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.16□□□□□ -1.9
DDR1Q08345 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.16□□□□□ -1.9
DDR1Q08345 DEFB122-202ENST00000569013 197 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 AL355375.2-201ENST00000574825 175 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 AP000942.4-201ENST00000604811 241 ntBASIC3.16□□□□□ -1.9
DDR1Q08345 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.16□□□□□ -1.9
DDR1Q08345 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.16□□□□□ -1.9
DDR1Q08345 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDR1Q08345 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDR1Q08345 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
DDR1Q08345 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
DDR1Q08345 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
DDR1Q08345 RPL9P7-201ENST00000330965 580 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 RNA5SP99-201ENST00000364020 114 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 RNU6-522P-201ENST00000364497 107 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 RNU6-767P-201ENST00000384132 107 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.15□□□□□ -1.91
DDR1Q08345 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.15□□□□□ -1.91
DDR1Q08345 AC108210.2-201ENST00000503681 201 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 AC091885.1-201ENST00000506658 268 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DDR1Q08345 FGF7P4-201ENST00000509595 295 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 RNU6-327P-201ENST00000516270 127 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.15□□□□□ -1.91
DDR1Q08345 AC105029.1-201ENST00000520250 669 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 AP005597.4-201ENST00000526762 229 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.15□□□□□ -1.91
DDR1Q08345 AC011712.1-201ENST00000588959 234 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 AC021646.1-201ENST00000605469 484 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.15□□□□□ -1.91
DDR1Q08345 RNU6-89P-201ENST00000606519 100 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.15□□□□□ -1.91
DDR1Q08345 MIR1302-1-201ENST00000637932 143 ntBASIC3.15□□□□□ -1.91
DDR1Q08345 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
DDR1Q08345 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
DDR1Q08345 Y_RNA.167-201ENST00000363735 109 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 Y_RNA.231-201ENST00000364358 102 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 RNU6-140P-201ENST00000384566 108 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 RNU6-817P-201ENST00000391083 104 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.14□□□□□ -1.91
DDR1Q08345 AL359511.1-201ENST00000402970 211 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 BTF3L4P3-201ENST00000418879 476 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 AC099548.1-201ENST00000421443 426 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 HMGB1P27-201ENST00000431429 603 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 GPM6BP2-201ENST00000432046 144 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 AL714022.1-201ENST00000439897 151 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 GPM6BP1-201ENST00000446387 144 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 AC104058.1-201ENST00000448028 297 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 RPS27AP9-201ENST00000477681 438 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.14□□□□□ -1.91
DDR1Q08345 RBBP4P6-201ENST00000508098 202 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.14□□□□□ -1.91
DDR1Q08345 RNU6-277P-201ENST00000516272 106 ntBASIC3.14□□□□□ -1.91
DDR1Q08345 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.14□□□□□ -1.91
DDR1Q08345 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.14□□□□□ -1.91
DDR1Q08345 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms