Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.5□□□□□ -2.33
HIST1H1AQ02539 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
HIST1H1AQ02539 MTND4P16-201ENST00000466108 1367 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 MIR373-201ENST00000362273 69 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 MIR96-201ENST00000362288 78 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 RNU6-17P-201ENST00000384245 107 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 RNU6-18P-201ENST00000384527 107 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 FTH1P15-201ENST00000406984 280 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 ISCA1P6-201ENST00000427740 390 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 CBX3P6-201ENST00000430257 527 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 AC108059.3-201ENST00000456388 214 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 RNA5SP503-201ENST00000517047 117 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 HSPE1P4-201ENST00000550617 308 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 BNIP3P16-201ENST00000589779 534 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 AP002906.1-201ENST00000603405 233 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 MIR3529-201ENST00000637713 78 ntBASIC0.49□□□□□ -2.33
HIST1H1AQ02539 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
HIST1H1AQ02539 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
HIST1H1AQ02539 SNORD114-24-201ENST00000365029 72 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 RNU6-932P-201ENST00000391108 106 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HIST1H1AQ02539 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HIST1H1AQ02539 AL117342.1-201ENST00000404861 406 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.48□□□□□ -2.33
HIST1H1AQ02539 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.48□□□□□ -2.33
HIST1H1AQ02539 TIMM9P1-201ENST00000436122 256 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.48□□□□□ -2.33
HIST1H1AQ02539 RNFT1P2-201ENST00000443064 757 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 RNU6-333P-201ENST00000459117 107 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 MED28P2-201ENST00000475771 317 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 PDCD5P2-201ENST00000507570 312 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
HIST1H1AQ02539 RNA5SP481-201ENST00000516814 122 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 DEFB108E-201ENST00000524692 240 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.48□□□□□ -2.33
HIST1H1AQ02539 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.48□□□□□ -2.33
HIST1H1AQ02539 HMGB1P33-201ENST00000563485 527 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 AC133485.1-201ENST00000567176 124 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 AC138907.6-201ENST00000568401 126 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 AC138915.2-201ENST00000569776 97 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 AC137800.2-201ENST00000574375 120 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 DPPA3P3-201ENST00000603842 430 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 OR4G1P-203ENST00000641984 1631 ntBASIC0.48□□□□□ -2.33
HIST1H1AQ02539 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HIST1H1AQ02539 RNU6-1207P-201ENST00000384343 107 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 MIR92A1-201ENST00000385233 78 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 GTF2IP13-201ENST00000438487 386 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.47□□□□□ -2.33
HIST1H1AQ02539 AL078601.1-201ENST00000444542 271 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.47□□□□□ -2.33
HIST1H1AQ02539 RAP1BP2-201ENST00000478270 544 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 AC104629.1-201ENST00000494226 508 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.47□□□□□ -2.33
HIST1H1AQ02539 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.47□□□□□ -2.33
HIST1H1AQ02539 MIR3664-201ENST00000579074 99 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 AC126365.2-201ENST00000580630 379 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
HIST1H1AQ02539 AC084824.5-201ENST00000612009 413 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 MIR1248-201ENST00000629190 106 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 AC099654.9-201ENST00000637055 678 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.47□□□□□ -2.33
HIST1H1AQ02539 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
HIST1H1AQ02539 AC009541.1-201ENST00000438279 2662 ntBASIC0.47□□□□□ -2.33
HIST1H1AQ02539 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
HIST1H1AQ02539 SNORD114-6-201ENST00000364393 72 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 MIR520E-201ENST00000384867 87 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
HIST1H1AQ02539 AC114482.1-201ENST00000418010 247 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.46□□□□□ -2.34
HIST1H1AQ02539 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST1H1AQ02539 RPS27AP8-201ENST00000452665 445 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 snoU13.14-201ENST00000459372 104 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 AC010631.1-201ENST00000474150 156 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST1H1AQ02539 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST1H1AQ02539 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.46□□□□□ -2.34
HIST1H1AQ02539 AL356057.1-201ENST00000533798 831 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 AC011604.1-201ENST00000545978 196 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.46□□□□□ -2.34
HIST1H1AQ02539 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST1H1AQ02539 BNIP3P31-201ENST00000604515 566 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 AL365204.3-201ENST00000612448 685 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 AC243773.3-201ENST00000613270 256 ntBASIC0.46□□□□□ -2.34
HIST1H1AQ02539 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.46□□□□□ -2.34
HIST1H1AQ02539 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST1H1AQ02539 LINC02555-201ENST00000563933 1951 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms