Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC013412.1-201ENST00000610687 192 ntBASIC0.71□□□□□ -2.3
VBP1P61758 RMST_4.1-201ENST00000616886 107 ntBASIC0.71□□□□□ -2.3
VBP1P61758 MIR6852-201ENST00000621699 66 ntBASIC0.71□□□□□ -2.3
VBP1P61758 AC120349.3-201ENST00000624377 529 ntBASIC0.71□□□□□ -2.3
VBP1P61758 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
VBP1P61758 RNU6-777P-201ENST00000364265 104 ntBASIC0.7□□□□□ -2.3
VBP1P61758 RNU6-701P-201ENST00000384059 107 ntBASIC0.7□□□□□ -2.3
VBP1P61758 RNU6-166P-201ENST00000384371 107 ntBASIC0.7□□□□□ -2.3
VBP1P61758 MIR19A-201ENST00000384878 82 ntBASIC0.7□□□□□ -2.3
VBP1P61758 SNORA40C-201ENST00000391285 128 ntBASIC0.7□□□□□ -2.3
VBP1P61758 AL357139.1-201ENST00000407792 426 ntBASIC0.7□□□□□ -2.3
VBP1P61758 OOSP1P1-201ENST00000423265 274 ntBASIC0.7□□□□□ -2.3
VBP1P61758 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.7□□□□□ -2.3
VBP1P61758 AC005094.1-201ENST00000440420 368 ntBASIC0.7□□□□□ -2.3
VBP1P61758 MTND4P25-201ENST00000441039 533 ntBASIC0.7□□□□□ -2.3
VBP1P61758 RPS27AP8-201ENST00000452665 445 ntBASIC0.7□□□□□ -2.3
VBP1P61758 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.7□□□□□ -2.3
VBP1P61758 RNU6-333P-201ENST00000459117 107 ntBASIC0.7□□□□□ -2.3
VBP1P61758 RNA5SP481-201ENST00000516814 122 ntBASIC0.7□□□□□ -2.3
VBP1P61758 RNU6-64P-201ENST00000517119 105 ntBASIC0.7□□□□□ -2.3
VBP1P61758 AC022784.5-201ENST00000522241 437 ntBASIC0.7□□□□□ -2.3
VBP1P61758 AC087441.2-201ENST00000529141 262 ntBASIC0.7□□□□□ -2.3
VBP1P61758 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.7□□□□□ -2.3
VBP1P61758 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.7□□□□□ -2.3
VBP1P61758 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.7□□□□□ -2.3
VBP1P61758 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.7□□□□□ -2.3
VBP1P61758 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
VBP1P61758 LINC02555-201ENST00000563933 1951 ntBASIC0.7□□□□□ -2.3
VBP1P61758 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.7□□□□□ -2.3
VBP1P61758 AC245060.5-201ENST00000610778 3293 ntBASIC0.69□□□□□ -2.3
VBP1P61758 snoU2_19.1-201ENST00000362361 80 ntBASIC0.69□□□□□ -2.3
VBP1P61758 SNORA4.3-201ENST00000365564 137 ntBASIC0.69□□□□□ -2.3
VBP1P61758 MIR548B-201ENST00000385247 97 ntBASIC0.69□□□□□ -2.3
VBP1P61758 AL603865.2-201ENST00000401679 213 ntBASIC0.69□□□□□ -2.3
VBP1P61758 MIR1289-2-201ENST00000408360 111 ntBASIC0.69□□□□□ -2.3
VBP1P61758 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
VBP1P61758 RNU2-23P-201ENST00000410545 195 ntBASIC0.69□□□□□ -2.3
VBP1P61758 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.69□□□□□ -2.3
VBP1P61758 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.69□□□□□ -2.3
VBP1P61758 MTCO2P1-201ENST00000424648 477 ntBASIC0.69□□□□□ -2.3
VBP1P61758 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.69□□□□□ -2.3
VBP1P61758 RNU7-95P-201ENST00000459222 64 ntBASIC0.69□□□□□ -2.3
VBP1P61758 RPL39P36-201ENST00000490784 156 ntBASIC0.69□□□□□ -2.3
VBP1P61758 AC097473.1-201ENST00000508142 408 ntBASIC0.69□□□□□ -2.3
VBP1P61758 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.69□□□□□ -2.3
VBP1P61758 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.69□□□□□ -2.3
VBP1P61758 RNA5SP503-201ENST00000517047 117 ntBASIC0.69□□□□□ -2.3
VBP1P61758 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.69□□□□□ -2.3
VBP1P61758 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.69□□□□□ -2.3
VBP1P61758 MTCO2P2-201ENST00000591258 225 ntBASIC0.69□□□□□ -2.3
VBP1P61758 BNIP3P9-201ENST00000603714 553 ntBASIC0.69□□□□□ -2.3
VBP1P61758 AP000654.2-201ENST00000605633 586 ntBASIC0.69□□□□□ -2.3
VBP1P61758 AC008945.2-201ENST00000606056 604 ntBASIC0.69□□□□□ -2.3
VBP1P61758 AC025754.2-201ENST00000606491 432 ntBASIC0.69□□□□□ -2.3
VBP1P61758 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.69□□□□□ -2.3
VBP1P61758 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
VBP1P61758 AP000676.3-201ENST00000623299 569 ntBASIC0.69□□□□□ -2.3
VBP1P61758 Y_RNA.111-201ENST00000363248 100 ntBASIC0.68□□□□□ -2.3
VBP1P61758 RNU6-853P-201ENST00000364306 107 ntBASIC0.68□□□□□ -2.3
VBP1P61758 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
VBP1P61758 RNU6-622P-201ENST00000384272 103 ntBASIC0.68□□□□□ -2.3
VBP1P61758 MIR19B1-201ENST00000384829 87 ntBASIC0.68□□□□□ -2.3
VBP1P61758 SNORA11-201ENST00000408789 128 ntBASIC0.68□□□□□ -2.3
VBP1P61758 Y_RNA.597-201ENST00000410463 100 ntBASIC0.68□□□□□ -2.3
VBP1P61758 RNU2-7P-201ENST00000410794 178 ntBASIC0.68□□□□□ -2.3
VBP1P61758 AP1B1P2-201ENST00000416196 106 ntBASIC0.68□□□□□ -2.3
VBP1P61758 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
VBP1P61758 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.68□□□□□ -2.3
VBP1P61758 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.68□□□□□ -2.3
VBP1P61758 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.68□□□□□ -2.3
VBP1P61758 TRBVA-201ENST00000498804 316 ntBASIC0.68□□□□□ -2.3
VBP1P61758 RNU5A-4P-201ENST00000516588 111 ntBASIC0.68□□□□□ -2.3
VBP1P61758 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
VBP1P61758 DEFB131D-201ENST00000526803 184 ntBASIC0.68□□□□□ -2.3
VBP1P61758 AP000873.5-201ENST00000533906 236 ntBASIC0.68□□□□□ -2.3
VBP1P61758 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
VBP1P61758 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.68□□□□□ -2.3
VBP1P61758 AL358072.1-201ENST00000604156 575 ntBASIC0.68□□□□□ -2.3
VBP1P61758 AL365434.2-201ENST00000607979 234 ntBASIC0.68□□□□□ -2.3
VBP1P61758 AC023158.2-201ENST00000614876 543 ntBASIC0.68□□□□□ -2.3
VBP1P61758 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.68□□□□□ -2.3
VBP1P61758 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
VBP1P61758 MIR608-201ENST00000384820 100 ntBASIC0.67□□□□□ -2.3
VBP1P61758 FCF1P10-201ENST00000407590 479 ntBASIC0.67□□□□□ -2.3
VBP1P61758 RNU4-62P-201ENST00000410125 130 ntBASIC0.67□□□□□ -2.3
VBP1P61758 MRPS36P1-201ENST00000421291 307 ntBASIC0.67□□□□□ -2.3
VBP1P61758 RPS15AP10-201ENST00000432472 382 ntBASIC0.67□□□□□ -2.3
VBP1P61758 TIMM9P1-201ENST00000436122 256 ntBASIC0.67□□□□□ -2.3
VBP1P61758 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.67□□□□□ -2.3
VBP1P61758 AL606517.1-201ENST00000446914 387 ntBASIC0.67□□□□□ -2.3
VBP1P61758 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.67□□□□□ -2.3
VBP1P61758 snoU109.2-201ENST00000459316 135 ntBASIC0.67□□□□□ -2.3
VBP1P61758 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
VBP1P61758 AC009646.1-201ENST00000510455 318 ntBASIC0.67□□□□□ -2.3
VBP1P61758 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.67□□□□□ -2.3
VBP1P61758 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
VBP1P61758 AC021451.1-201ENST00000523498 1129 ntBASIC0.67□□□□□ -2.3
VBP1P61758 AC104417.1-201ENST00000523974 751 ntBASIC0.67□□□□□ -2.3
VBP1P61758 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.67□□□□□ -2.3
VBP1P61758 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms