Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU7-26P-201ENST00000458980 63 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 DYNLL1P5-201ENST00000467158 270 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.26□□□□□ -1.89
RHBDL3P58872 RNU6-189P-201ENST00000516120 101 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.26□□□□□ -1.89
RHBDL3P58872 CENPUP1-201ENST00000526649 1202 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 AC090115.3-201ENST00000553218 849 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.26□□□□□ -1.89
RHBDL3P58872 U4.5-201ENST00000617137 123 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.26□□□□□ -1.89
RHBDL3P58872 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RHBDL3P58872 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RHBDL3P58872 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RHBDL3P58872 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
RHBDL3P58872 RNU6-529P-201ENST00000363383 104 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 RNU4-66P-201ENST00000365199 138 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 XGY1-201ENST00000381172 446 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 RNA5SP219-201ENST00000390940 113 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 AL590002.1-201ENST00000406554 418 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 RNU6-648P-201ENST00000410190 107 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 RNU2-23P-201ENST00000410545 195 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 SNORD56-201ENST00000413522 71 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDL3P58872 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDL3P58872 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDL3P58872 TPTE2P5-203ENST00000458118 728 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 MTCO3P38-201ENST00000468910 766 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 AP001025.1-201ENST00000486139 332 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDL3P58872 COPS8P3-201ENST00000526024 482 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 OR11H5P-201ENST00000554039 926 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.25□□□□□ -1.89
RHBDL3P58872 MIR5583-1-201ENST00000580941 59 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 ZNF861P-201ENST00000588126 639 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 VN1R107P-201ENST00000601784 209 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 AC025165.5-201ENST00000602802 578 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 APOOP1-201ENST00000604695 592 ntBASIC3.25□□□□□ -1.89
RHBDL3P58872 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDL3P58872 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RHBDL3P58872 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RHBDL3P58872 MAPK10-266ENST00000641066 6555 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 AC008264.2-201ENST00000610193 3731 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.24□□□□□ -1.89
RHBDL3P58872 Y_RNA.41-201ENST00000362646 102 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 Y_RNA.372-201ENST00000365599 102 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 MIR181A2-201ENST00000384863 110 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 RNA5SP344-201ENST00000411081 104 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 AC003685.2-201ENST00000422795 395 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.24□□□□□ -1.89
RHBDL3P58872 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.24□□□□□ -1.89
RHBDL3P58872 Y_RNA.654-201ENST00000497848 106 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 RPL38P4-201ENST00000502376 214 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.24□□□□□ -1.89
RHBDL3P58872 SNORA25.11-201ENST00000515935 105 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RHBDL3P58872 AL133241.1-201ENST00000556832 487 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.24□□□□□ -1.89
RHBDL3P58872 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.24□□□□□ -1.89
RHBDL3P58872 DISC2.1-201ENST00000612827 205 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 AC008121.3-201ENST00000618726 433 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 YWHAEP7-203ENST00000622054 312 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 AC084035.1-201ENST00000634543 607 ntBASIC3.24□□□□□ -1.89
RHBDL3P58872 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RHBDL3P58872 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
RHBDL3P58872 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RHBDL3P58872 Y_RNA.9-201ENST00000362354 101 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RHBDL3P58872 MIR196B-201ENST00000384852 84 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 MIR186-201ENST00000384988 86 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 POLHP1-201ENST00000411806 470 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 AL451074.5-201ENST00000415894 435 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.23□□□□□ -1.89
RHBDL3P58872 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.23□□□□□ -1.89
RHBDL3P58872 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 AL589823.1-201ENST00000429577 183 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 RNU7-138P-201ENST00000459479 64 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 AC073901.1-201ENST00000462471 408 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.23□□□□□ -1.89
RHBDL3P58872 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RHBDL3P58872 AC008526.1-201ENST00000509149 338 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 AC092954.2-201ENST00000609103 430 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 AL020991.1-201ENST00000612314 373 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 AC103705.1-201ENST00000619013 241 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 MIR1321-201ENST00000637766 79 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 AC068137.3-201ENST00000639191 341 ntBASIC3.23□□□□□ -1.89
RHBDL3P58872 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RHBDL3P58872 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RHBDL3P58872 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RHBDL3P58872 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RHBDL3P58872 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.22□□□□□ -1.89
RHBDL3P58872 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RHBDL3P58872 MIR26A1-201ENST00000362205 77 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 RNU6-655P-201ENST00000362858 107 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 RNA5SP68-201ENST00000363885 119 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 RNU6-105P-201ENST00000363909 104 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.22□□□□□ -1.89
RHBDL3P58872 RNU6-38P-201ENST00000384085 107 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 AL445529.1-201ENST00000398713 389 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms