| BACE1 | P56817 | ZBED5-201 | ENST00000413761 | 2512 nt | APPRIS P1 TSL 1 (best) BASIC | 2.4 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC093536.2-201 | ENST00000565257 | 1406 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| BACE1 | P56817 | ASPM-202 | ENST00000367408 | 3747 nt | TSL 1 (best) BASIC | 2.4 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-552P-201 | ENST00000362869 | 119 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-1159P-201 | ENST00000362933 | 107 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-996P-201 | ENST00000365438 | 107 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | Y_RNA.481-201 | ENST00000384373 | 102 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-1158P-201 | ENST00000391167 | 107 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | MTCO3P40-201 | ENST00000392516 | 676 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | MDM2-210 | ENST00000393413 | 657 nt | TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AL139156.1-201 | ENST00000412785 | 841 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AL353621.1-201 | ENST00000418219 | 243 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC092660.1-201 | ENST00000420648 | 371 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC093151.3-203 | ENST00000422305 | 514 nt | TSL 3 BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | PTGES3P4-201 | ENST00000426243 | 356 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AL024508.1-201 | ENST00000432477 | 505 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC092001.1-201 | ENST00000453012 | 261 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AP000705.1-201 | ENST00000454567 | 350 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC107626.1-201 | ENST00000471084 | 183 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | CKS1BP2-201 | ENST00000497342 | 240 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC022272.1-201 | ENST00000503478 | 777 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC116655.1-201 | ENST00000508324 | 901 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | LRRC34P2-201 | ENST00000514850 | 553 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | SCARNA11.3-201 | ENST00000517276 | 130 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | HSPE1P20-201 | ENST00000538133 | 289 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC092325.1-201 | ENST00000566449 | 554 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | LINC02210-208 | ENST00000585118 | 546 nt | TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | ZNF616-202 | ENST00000596290 | 568 nt | TSL 4 BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC011494.1-201 | ENST00000596454 | 237 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | BX546450.2-201 | ENST00000602419 | 435 nt | TSL 5 BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | Y_RNA.783-201 | ENST00000613546 | 102 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | YWHAEP7-203 | ENST00000622054 | 312 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC099654.12-201 | ENST00000639868 | 649 nt | BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | LINC01592-202 | ENST00000518540 | 2367 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | HAS2-201 | ENST00000303924 | 4190 nt | APPRIS P1 TSL 1 (best) BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | MCMDC2-201 | ENST00000313616 | 2043 nt | TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RGS22-214 | ENST00000523287 | 4033 nt | APPRIS ALT2 TSL 2 BASIC | 2.39 | □□□□□ -2.03 | | |
| BACE1 | P56817 | MAPK10-266 | ENST00000641066 | 6555 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | DPY19L2P1-203 | ENST00000458672 | 3347 nt | TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | Y_RNA.41-201 | ENST00000362646 | 102 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-1322P-201 | ENST00000364309 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | SNORA68.1-201 | ENST00000364537 | 132 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-715P-201 | ENST00000365204 | 103 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-1280P-201 | ENST00000365211 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU1-109P-201 | ENST00000383960 | 147 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-45P-201 | ENST00000384471 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-19P-201 | ENST00000384718 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-903P-201 | ENST00000391270 | 109 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AL513475.1-201 | ENST00000406602 | 315 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6ATAC15P-201 | ENST00000408279 | 121 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNA5SP492-201 | ENST00000411330 | 114 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | HMGN2P35-201 | ENST00000412164 | 270 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | CYCSP49-201 | ENST00000420810 | 319 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AL139397.1-201 | ENST00000430456 | 644 nt | TSL 2 BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | MTND3P21-201 | ENST00000433774 | 331 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AL606489.2-201 | ENST00000433886 | 234 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC009296.1-201 | ENST00000443146 | 155 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AL163973.1-201 | ENST00000484753 | 577 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU5F-8P-201 | ENST00000515941 | 111 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-581P-201 | ENST00000516214 | 105 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | SNORA40.12-201 | ENST00000516329 | 111 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-720P-201 | ENST00000516363 | 108 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | MIR892C-201 | ENST00000516410 | 77 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-1178P-201 | ENST00000516674 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | OR5AQ1P-201 | ENST00000527596 | 927 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC104383.1-201 | ENST00000530297 | 370 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | EIF1P4-201 | ENST00000572664 | 335 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC073539.2-201 | ENST00000597113 | 165 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RMST_4.1-201 | ENST00000616886 | 107 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AL354950.2-201 | ENST00000617939 | 290 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| BACE1 | P56817 | SMARCAD1-206 | ENST00000509418 | 2348 nt | TSL 2 BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | MTND4P14-201 | ENST00000435799 | 1354 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-1085P-201 | ENST00000363576 | 107 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | Y_RNA.255-201 | ENST00000364581 | 97 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | MIR10A-201 | ENST00000385043 | 110 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC019129.1-201 | ENST00000403786 | 261 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | U3.37-201 | ENST00000408528 | 213 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNA5SP181-201 | ENST00000410246 | 98 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU6-607P-201 | ENST00000411283 | 108 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC016831.2-201 | ENST00000417179 | 352 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | MTCYBP8-201 | ENST00000422855 | 651 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AL669831.1-202 | ENST00000428504 | 417 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AL451060.1-203 | ENST00000431307 | 362 nt | TSL 3 BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | GTF2IP13-201 | ENST00000438487 | 386 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC016691.1-201 | ENST00000441321 | 413 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC092802.2-202 | ENST00000444665 | 371 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC073415.1-201 | ENST00000449240 | 153 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC114501.3-201 | ENST00000453648 | 164 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | SNRPFP3-201 | ENST00000457792 | 225 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | SRRM1P2-201 | ENST00000464531 | 1192 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC083798.1-201 | ENST00000472671 | 131 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC011005.2-201 | ENST00000487324 | 359 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | GZMAP1-201 | ENST00000503054 | 631 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AIG1P1-201 | ENST00000503376 | 148 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | MTCO3P9-201 | ENST00000506989 | 781 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | AC110009.1-201 | ENST00000512965 | 451 nt | TSL 5 BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNA5SP182-201 | ENST00000516064 | 82 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU1-86P-201 | ENST00000516108 | 154 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | RNU4ATAC8P-201 | ENST00000516196 | 109 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| BACE1 | P56817 | SCARNA17.1-201 | ENST00000516211 | 143 nt | BASIC | 2.37 | □□□□□ -2.03 | | |