Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AP003122.4-201ENST00000530980 758 ntBASIC1.57□□□□□ -2.16
CLDN6P56747 AC007375.1-201ENST00000554513 578 ntBASIC1.57□□□□□ -2.16
CLDN6P56747 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
CLDN6P56747 SNORA4-201ENST00000584302 138 ntBASIC1.57□□□□□ -2.16
CLDN6P56747 BNIP3P25-201ENST00000596023 559 ntBASIC1.57□□□□□ -2.16
CLDN6P56747 CLIC4P2-201ENST00000601934 717 ntBASIC1.57□□□□□ -2.16
CLDN6P56747 AL139022.2-201ENST00000606934 443 ntBASIC1.57□□□□□ -2.16
CLDN6P56747 Z82243.1-201ENST00000609432 473 ntBASIC1.57□□□□□ -2.16
CLDN6P56747 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.57□□□□□ -2.16
CLDN6P56747 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.57□□□□□ -2.16
CLDN6P56747 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLDN6P56747 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CLDN6P56747 AL354685.2-201ENST00000448218 1447 ntBASIC1.57□□□□□ -2.16
CLDN6P56747 ZNF876P-202ENST00000398732 1485 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 RNU6-487P-201ENST00000365430 104 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 RNU6-546P-201ENST00000383991 107 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 MIR10A-201ENST00000385043 110 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 RNA5SP465-201ENST00000391195 109 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 RNA5SP212-201ENST00000391223 107 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 MIR1262-201ENST00000408276 93 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 MIR1283-2-201ENST00000408621 87 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 RNU2-48P-201ENST00000410694 191 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 BX510359.4-201ENST00000423750 193 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 AL627311.1-201ENST00000431514 115 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 GDI2P2-201ENST00000445131 608 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 AC245102.2-201ENST00000448956 180 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 AL009048.1-201ENST00000450437 298 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 PRELID3BP1-201ENST00000457142 540 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 RNA5SP57-201ENST00000459463 123 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 snoU13.18-201ENST00000459483 104 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 AL121594.1-201ENST00000475906 575 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 UBE2V1P12-201ENST00000503954 474 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
CLDN6P56747 RNU2-44P-201ENST00000516795 194 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.56□□□□□ -2.16
CLDN6P56747 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN6P56747 AL158032.1-201ENST00000605401 106 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 AL359547.2-201ENST00000615810 418 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 AL359314.1-201ENST00000616913 261 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 AC010608.3-201ENST00000625048 527 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 AC006927.4-201ENST00000639187 543 ntBASIC1.56□□□□□ -2.16
CLDN6P56747 RNU6-529P-201ENST00000363383 104 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 RNU6-622P-201ENST00000384272 103 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 RNU6-611P-201ENST00000384276 104 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 SNORD116-20-201ENST00000384529 92 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.55□□□□□ -2.16
CLDN6P56747 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 CALM1P1-201ENST00000442082 433 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.55□□□□□ -2.16
CLDN6P56747 MTND1P12-201ENST00000455231 147 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 AC112206.3-201ENST00000514578 389 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN6P56747 AP005660.1-201ENST00000522972 293 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 MTND4LP18-201ENST00000526864 291 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 CR383656.8-201ENST00000549046 145 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 AC104581.2-201ENST00000572227 430 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 MIR3618-201ENST00000580330 88 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 MIR3118-1-201ENST00000581787 76 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 AL031281.1-201ENST00000604049 488 ntBASIC1.55□□□□□ -2.16
CLDN6P56747 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLDN6P56747 RNU6-212P-201ENST00000362642 104 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 SNORA7.1-201ENST00000363750 139 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 RNU6-1210P-201ENST00000363775 107 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 SNORD14B-201ENST00000364533 90 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 RNU6-660P-201ENST00000364566 109 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 RNU6-392P-201ENST00000364926 101 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 SNORD48-201ENST00000364953 64 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 SNORD14D-201ENST00000384390 87 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 RNU11-3P-201ENST00000391111 133 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN6P56747 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN6P56747 RPL31P63-201ENST00000422565 375 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 RPS27AP14-201ENST00000422868 454 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 MTCO2P23-201ENST00000425216 680 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 AL513185.2-201ENST00000425543 193 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 MTCO3P5-201ENST00000433620 714 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 RPL37P21-201ENST00000435890 276 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN6P56747 HMGN1P7-201ENST00000491722 313 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN6P56747 RNU1-92P-201ENST00000517017 135 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.54□□□□□ -2.16
CLDN6P56747 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.54□□□□□ -2.16
CLDN6P56747 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN6P56747 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN6P56747 ZNF519P3-201ENST00000557158 1032 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 AL354943.1-201ENST00000572103 781 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 AC090897.2-201ENST00000581715 130 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 AC012065.4-201ENST00000602445 679 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.54□□□□□ -2.16
CLDN6P56747 AL157834.3-201ENST00000615543 103 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 U6.42-201ENST00000618440 107 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 AL031667.3-201ENST00000620124 655 ntBASIC1.54□□□□□ -2.16
CLDN6P56747 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CLDN6P56747 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN6P56747 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CLDN6P56747 RNU4-13P-201ENST00000364019 141 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
CLDN6P56747 MIR597-201ENST00000384968 97 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms