Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.43□□□□□ -1.7
EPHA4P54764 SALL4P2-201ENST00000423288 2910 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.43□□□□□ -1.7
EPHA4P54764 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
EPHA4P54764 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHA4P54764 AC106871.1-201ENST00000568324 3102 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
EPHA4P54764 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
EPHA4P54764 Y_RNA.182-201ENST00000363880 111 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 BPY2DP-201ENST00000422208 265 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 AL356387.2-201ENST00000422272 243 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 AL162725.1-201ENST00000435405 301 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHA4P54764 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.43□□□□□ -1.7
EPHA4P54764 AC107626.1-201ENST00000471084 183 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.43□□□□□ -1.7
EPHA4P54764 RNU6-928P-201ENST00000516876 104 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 IPO5P1-202ENST00000600039 287 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 AC091979.2-201ENST00000607514 214 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 AL008718.3-201ENST00000610217 321 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHA4P54764 AL034408.1-202ENST00000636088 415 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
EPHA4P54764 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
EPHA4P54764 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
EPHA4P54764 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
EPHA4P54764 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.43□□□□□ -1.7
EPHA4P54764 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
EPHA4P54764 AL133383.2-201ENST00000622958 2336 ntBASIC4.43□□□□□ -1.7
EPHA4P54764 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
EPHA4P54764 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
EPHA4P54764 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
EPHA4P54764 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
EPHA4P54764 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
EPHA4P54764 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
EPHA4P54764 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.42□□□□□ -1.7
EPHA4P54764 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
EPHA4P54764 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
EPHA4P54764 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.42□□□□□ -1.7
EPHA4P54764 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
EPHA4P54764 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
EPHA4P54764 Y_RNA.75-201ENST00000362927 97 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 RNU6-324P-201ENST00000363957 106 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 SNORA70.2-201ENST00000364506 135 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 SNORA1.3-201ENST00000384676 136 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 U3.26-201ENST00000391236 204 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 ELOCP21-201ENST00000412558 336 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 AC009963.1-201ENST00000417265 157 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
EPHA4P54764 AC011276.1-201ENST00000469688 323 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 RPS29P20-201ENST00000489592 171 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.42□□□□□ -1.7
EPHA4P54764 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.42□□□□□ -1.7
EPHA4P54764 AC027176.1-201ENST00000560204 514 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 MIR3923-201ENST00000579521 83 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 MIR3684-201ENST00000579779 74 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.42□□□□□ -1.7
EPHA4P54764 AC083809.1-201ENST00000615051 472 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
EPHA4P54764 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
EPHA4P54764 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.42□□□□□ -1.7
EPHA4P54764 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.42□□□□□ -1.7
EPHA4P54764 AC027290.2-201ENST00000623210 18662 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 CUL1P1-201ENST00000509510 2425 ntBASIC4.42□□□□□ -1.7
EPHA4P54764 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHA4P54764 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHA4P54764 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHA4P54764 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
EPHA4P54764 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
EPHA4P54764 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHA4P54764 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHA4P54764 RNU6-727P-201ENST00000363592 107 ntBASIC4.41□□□□□ -1.7
EPHA4P54764 RNA5SP28-201ENST00000363841 119 ntBASIC4.41□□□□□ -1.7
EPHA4P54764 Y_RNA.568-201ENST00000384742 113 ntBASIC4.41□□□□□ -1.7
EPHA4P54764 U3.22-201ENST00000391120 215 ntBASIC4.41□□□□□ -1.7
EPHA4P54764 AC091390.1-201ENST00000433904 331 ntBASIC4.41□□□□□ -1.7
EPHA4P54764 AP000873.1-201ENST00000463987 400 ntBASIC4.41□□□□□ -1.7
EPHA4P54764 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHA4P54764 TGIF1P1-201ENST00000558095 802 ntBASIC4.41□□□□□ -1.7
EPHA4P54764 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.41□□□□□ -1.7
EPHA4P54764 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHA4P54764 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
EPHA4P54764 AC007656.2-201ENST00000624902 4547 ntBASIC4.41□□□□□ -1.7
EPHA4P54764 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EPHA4P54764 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
EPHA4P54764 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHA4P54764 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
EPHA4P54764 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.41□□□□□ -1.7
EPHA4P54764 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
EPHA4P54764 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
EPHA4P54764 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.4□□□□□ -1.7
EPHA4P54764 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
EPHA4P54764 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
EPHA4P54764 RNU4-84P-201ENST00000364200 139 ntBASIC4.4□□□□□ -1.71
EPHA4P54764 Y_RNA.215-201ENST00000364204 112 ntBASIC4.4□□□□□ -1.71
EPHA4P54764 RNA5SP509-201ENST00000364577 119 ntBASIC4.4□□□□□ -1.71
EPHA4P54764 Y_RNA.412-201ENST00000384001 104 ntBASIC4.4□□□□□ -1.71
EPHA4P54764 RNA5SP372-201ENST00000390836 115 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms