Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 FARSBP1-201ENST00000435808 1778 ntBASIC0.87□□□□□ -2.27
NUP98P52948 RNA5SP499-201ENST00000363982 119 ntBASIC0.87□□□□□ -2.27
NUP98P52948 MIR625-201ENST00000385047 85 ntBASIC0.87□□□□□ -2.27
NUP98P52948 MIR216A-201ENST00000385063 110 ntBASIC0.87□□□□□ -2.27
NUP98P52948 MTND5P14-201ENST00000441481 1267 ntBASIC0.87□□□□□ -2.27
NUP98P52948 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.87□□□□□ -2.27
NUP98P52948 MTND2P30-201ENST00000456663 382 ntBASIC0.87□□□□□ -2.27
NUP98P52948 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.87□□□□□ -2.27
NUP98P52948 RNU6-667P-201ENST00000517186 102 ntBASIC0.87□□□□□ -2.27
NUP98P52948 RNU6-902P-201ENST00000517212 91 ntBASIC0.87□□□□□ -2.27
NUP98P52948 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.87□□□□□ -2.27
NUP98P52948 AC005668.1-201ENST00000571142 476 ntBASIC0.87□□□□□ -2.27
NUP98P52948 AC126365.2-201ENST00000580630 379 ntBASIC0.87□□□□□ -2.27
NUP98P52948 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
NUP98P52948 AL161798.1-201ENST00000604630 131 ntBASIC0.87□□□□□ -2.27
NUP98P52948 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.87□□□□□ -2.27
NUP98P52948 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.87□□□□□ -2.27
NUP98P52948 AC010487.4-201ENST00000637027 61 ntBASIC0.87□□□□□ -2.27
NUP98P52948 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
NUP98P52948 Y_RNA.234-201ENST00000364409 97 ntBASIC0.86□□□□□ -2.27
NUP98P52948 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.86□□□□□ -2.27
NUP98P52948 MIR1267-201ENST00000408723 78 ntBASIC0.86□□□□□ -2.27
NUP98P52948 RNA5SP100-201ENST00000410903 110 ntBASIC0.86□□□□□ -2.27
NUP98P52948 RNA5SP59-201ENST00000410922 110 ntBASIC0.86□□□□□ -2.27
NUP98P52948 RPS27P16-201ENST00000425758 201 ntBASIC0.86□□□□□ -2.27
NUP98P52948 AL591704.1-201ENST00000432574 275 ntBASIC0.86□□□□□ -2.27
NUP98P52948 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.86□□□□□ -2.27
NUP98P52948 AC117454.1-201ENST00000491120 168 ntBASIC0.86□□□□□ -2.27
NUP98P52948 AC021146.8-201ENST00000507455 733 ntBASIC0.86□□□□□ -2.27
NUP98P52948 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.86□□□□□ -2.27
NUP98P52948 AC133485.1-201ENST00000567176 124 ntBASIC0.86□□□□□ -2.27
NUP98P52948 AC138907.6-201ENST00000568401 126 ntBASIC0.86□□□□□ -2.27
NUP98P52948 AP001485.1-201ENST00000604799 199 ntBASIC0.86□□□□□ -2.27
NUP98P52948 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.86□□□□□ -2.27
NUP98P52948 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.86□□□□□ -2.27
NUP98P52948 uc_338.15-201ENST00000615470 191 ntBASIC0.86□□□□□ -2.27
NUP98P52948 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.86□□□□□ -2.27
NUP98P52948 AC092447.10-201ENST00000620607 1652 ntBASIC0.86□□□□□ -2.27
NUP98P52948 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
NUP98P52948 RNU6-414P-201ENST00000363705 104 ntBASIC0.85□□□□□ -2.27
NUP98P52948 RNU6-1210P-201ENST00000363775 107 ntBASIC0.85□□□□□ -2.27
NUP98P52948 EBAG9P1-201ENST00000418955 543 ntBASIC0.85□□□□□ -2.27
NUP98P52948 AC010153.1-201ENST00000432862 727 ntBASIC0.85□□□□□ -2.27
NUP98P52948 NEFMP1-201ENST00000443423 1006 ntBASIC0.85□□□□□ -2.27
NUP98P52948 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.85□□□□□ -2.27
NUP98P52948 AC104806.1-201ENST00000508720 308 ntBASIC0.85□□□□□ -2.27
NUP98P52948 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.85□□□□□ -2.27
NUP98P52948 COPS8P3-201ENST00000526024 482 ntBASIC0.85□□□□□ -2.27
NUP98P52948 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.85□□□□□ -2.27
NUP98P52948 MIR8084-201ENST00000614105 89 ntBASIC0.85□□□□□ -2.27
NUP98P52948 AC245060.5-201ENST00000610778 3293 ntBASIC0.85□□□□□ -2.27
NUP98P52948 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.85□□□□□ -2.27
NUP98P52948 AC008163.1-202ENST00000636004 2889 ntBASIC0.85□□□□□ -2.27
NUP98P52948 Y_RNA.178-201ENST00000363832 102 ntBASIC0.85□□□□□ -2.27
NUP98P52948 RNU6-343P-201ENST00000364709 104 ntBASIC0.85□□□□□ -2.27
NUP98P52948 SNORD65.1-201ENST00000390889 71 ntBASIC0.85□□□□□ -2.27
NUP98P52948 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.85□□□□□ -2.27
NUP98P52948 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.85□□□□□ -2.27
NUP98P52948 AL158053.1-201ENST00000441503 453 ntBASIC0.85□□□□□ -2.27
NUP98P52948 SEPT14P24-201ENST00000447236 180 ntBASIC0.85□□□□□ -2.27
NUP98P52948 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.85□□□□□ -2.27
NUP98P52948 AC024589.1-201ENST00000512207 263 ntBASIC0.85□□□□□ -2.27
NUP98P52948 MTCYBP43-201ENST00000513621 740 ntBASIC0.85□□□□□ -2.27
NUP98P52948 RNU2-53P-201ENST00000516257 147 ntBASIC0.85□□□□□ -2.27
NUP98P52948 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.85□□□□□ -2.27
NUP98P52948 RRN3P3-201ENST00000549207 578 ntBASIC0.85□□□□□ -2.27
NUP98P52948 AL512347.1-201ENST00000566420 503 ntBASIC0.85□□□□□ -2.27
NUP98P52948 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.85□□□□□ -2.27
NUP98P52948 RNU6-271P-201ENST00000363858 105 ntBASIC0.84□□□□□ -2.28
NUP98P52948 MIR618-201ENST00000385287 98 ntBASIC0.84□□□□□ -2.28
NUP98P52948 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.84□□□□□ -2.28
NUP98P52948 AL135790.2-201ENST00000437701 267 ntBASIC0.84□□□□□ -2.28
NUP98P52948 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.84□□□□□ -2.28
NUP98P52948 snoU13.9-201ENST00000458927 103 ntBASIC0.84□□□□□ -2.28
NUP98P52948 AC092989.1-201ENST00000481235 277 ntBASIC0.84□□□□□ -2.28
NUP98P52948 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.84□□□□□ -2.28
NUP98P52948 AC027338.1-201ENST00000514840 825 ntBASIC0.84□□□□□ -2.28
NUP98P52948 RNA5SP404-201ENST00000517118 132 ntBASIC0.84□□□□□ -2.28
NUP98P52948 RN7SKP256-201ENST00000517201 314 ntBASIC0.84□□□□□ -2.28
NUP98P52948 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.84□□□□□ -2.28
NUP98P52948 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.84□□□□□ -2.28
NUP98P52948 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.84□□□□□ -2.28
NUP98P52948 MIR5708-201ENST00000579723 85 ntBASIC0.84□□□□□ -2.28
NUP98P52948 AC012065.4-201ENST00000602445 679 ntBASIC0.84□□□□□ -2.28
NUP98P52948 AL360085.1-201ENST00000604713 532 ntBASIC0.84□□□□□ -2.28
NUP98P52948 AC090970.3-201ENST00000612566 866 ntBASIC0.84□□□□□ -2.28
NUP98P52948 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.84□□□□□ -2.28
NUP98P52948 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
NUP98P52948 AC007792.1-201ENST00000623023 402 ntBASIC0.84□□□□□ -2.28
NUP98P52948 AC008133.2-201ENST00000624540 351 ntBASIC0.84□□□□□ -2.28
NUP98P52948 Y_RNA.255-201ENST00000364581 97 ntBASIC0.83□□□□□ -2.28
NUP98P52948 RNU6-716P-201ENST00000365621 103 ntBASIC0.83□□□□□ -2.28
NUP98P52948 RNU6-939P-201ENST00000384634 107 ntBASIC0.83□□□□□ -2.28
NUP98P52948 AL133475.1-201ENST00000404414 305 ntBASIC0.83□□□□□ -2.28
NUP98P52948 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.83□□□□□ -2.28
NUP98P52948 RNU2-36P-201ENST00000410361 191 ntBASIC0.83□□□□□ -2.28
NUP98P52948 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.83□□□□□ -2.28
NUP98P52948 AC005094.1-201ENST00000440420 368 ntBASIC0.83□□□□□ -2.28
NUP98P52948 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.83□□□□□ -2.28
NUP98P52948 RPL30P7-201ENST00000479312 323 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms