Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PPP1R2P5-201ENST00000457256 603 ntBASIC2.81□□□□□ -1.96
CLCNKAP51800 snoU109.2-201ENST00000459316 135 ntBASIC2.81□□□□□ -1.96
CLCNKAP51800 AP001486.1-201ENST00000463339 476 ntBASIC2.81□□□□□ -1.96
CLCNKAP51800 AL049873.1-201ENST00000480540 376 ntBASIC2.81□□□□□ -1.96
CLCNKAP51800 RPS27P26-201ENST00000494583 239 ntBASIC2.81□□□□□ -1.96
CLCNKAP51800 AC103851.1-201ENST00000506833 274 ntBASIC2.81□□□□□ -1.96
CLCNKAP51800 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCNKAP51800 RNU6-864P-201ENST00000516256 108 ntBASIC2.81□□□□□ -1.96
CLCNKAP51800 CYCSP27-201ENST00000527643 293 ntBASIC2.81□□□□□ -1.96
CLCNKAP51800 AL645944.1-201ENST00000603857 493 ntBASIC2.81□□□□□ -1.96
CLCNKAP51800 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLCNKAP51800 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLCNKAP51800 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CLCNKAP51800 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CLCNKAP51800 Y_RNA.142-201ENST00000363491 102 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 RNU6-898P-201ENST00000365627 104 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 SNORA18.3-201ENST00000384122 132 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 MIR181B1-201ENST00000385240 110 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CLCNKAP51800 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCNKAP51800 RN7SKP32-201ENST00000410167 303 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 AL358075.3-201ENST00000426289 226 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCNKAP51800 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCNKAP51800 AL714022.1-201ENST00000439897 151 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCNKAP51800 MTATP6P7-201ENST00000453315 681 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 AC233279.1-201ENST00000455300 423 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 RNU6-1332P-201ENST00000516666 104 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 RNU6-256P-201ENST00000516747 97 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 RNU6-1088P-201ENST00000516850 104 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 AP000889.2-201ENST00000532684 490 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCNKAP51800 AC025423.5-201ENST00000550230 219 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCNKAP51800 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.8□□□□□ -1.96
CLCNKAP51800 MIR3672-201ENST00000584290 82 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 AL670379.10-201ENST00000604330 253 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 APOOP1-201ENST00000604695 592 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 AL670379.9-201ENST00000605428 253 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 RNU6-85P-201ENST00000605989 107 ntBASIC2.8□□□□□ -1.96
CLCNKAP51800 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCNKAP51800 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CLCNKAP51800 Y_RNA.301-201ENST00000364990 103 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 SNORD73A-201ENST00000386062 65 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 AL122016.1-201ENST00000403365 367 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 AL078595.1-201ENST00000404458 226 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.79□□□□□ -1.96
CLCNKAP51800 NDUFS5P4-201ENST00000412983 318 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 VN1R36P-201ENST00000414936 291 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCNKAP51800 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCNKAP51800 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.79□□□□□ -1.96
CLCNKAP51800 TRBVA-201ENST00000498804 316 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.79□□□□□ -1.96
CLCNKAP51800 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLCNKAP51800 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.79□□□□□ -1.96
CLCNKAP51800 AC005668.1-201ENST00000571142 476 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.79□□□□□ -1.96
CLCNKAP51800 MTCO3P13-201ENST00000577757 781 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 LARP7P1-201ENST00000605576 316 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 AC090115.4-201ENST00000609970 188 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 uc_338.5-201ENST00000611839 155 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 UCA1.1-201ENST00000620952 75 ntBASIC2.79□□□□□ -1.96
CLCNKAP51800 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLCNKAP51800 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.79□□□□□ -1.96
CLCNKAP51800 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLCNKAP51800 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
CLCNKAP51800 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLCNKAP51800 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
CLCNKAP51800 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-37P-201ENST00000362692 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU1-35P-201ENST00000362782 153 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 Y_RNA.111-201ENST00000363248 100 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-11P-201ENST00000364234 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-25P-201ENST00000383873 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-1-201ENST00000383898 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-48P-201ENST00000384161 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-36P-201ENST00000384172 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-4P-201ENST00000384205 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-5P-201ENST00000384238 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-3P-201ENST00000384314 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-16P-201ENST00000384385 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-15P-201ENST00000384534 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-2-201ENST00000384627 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-29P-201ENST00000384637 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-9-201ENST00000384776 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 RNU6-33P-201ENST00000384793 107 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.78□□□□□ -1.96
CLCNKAP51800 BPY2DP-201ENST00000422208 265 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 AL365400.1-201ENST00000431854 640 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 AC105272.1-201ENST00000438604 198 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 AC098831.1-201ENST00000440661 216 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 MTND4LP16-201ENST00000440828 295 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 GSTA11P-201ENST00000452866 669 ntBASIC2.78□□□□□ -1.96
CLCNKAP51800 AC091826.1-201ENST00000514065 313 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms