Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF144AP50876 SNORA74C-1-201ENST00000580726 201 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 MIR4436B2-201ENST00000581415 91 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 MIR4436B1-201ENST00000583272 91 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 MIR4443-201ENST00000585052 53 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 AC025946.2-201ENST00000603398 234 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 AL162713.1-201ENST00000604480 262 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF144AP50876 AC091905.4-201ENST00000623432 202 ntBASIC4.45□□□□□ -1.7
RNF144AP50876 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF144AP50876 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF144AP50876 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF144AP50876 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF144AP50876 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF144AP50876 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF144AP50876 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF144AP50876 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF144AP50876 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
RNF144AP50876 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RNF144AP50876 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF144AP50876 RNA5SP305-201ENST00000362665 119 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 RNA5SP502-201ENST00000362694 119 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 RNU6-884P-201ENST00000363889 107 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 Y_RNA.309-201ENST00000365046 111 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 MT-TT-201ENST00000387460 66 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 MIR526A2-201ENST00000390198 65 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 RNU6-1197P-201ENST00000391183 107 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 U3.30-201ENST00000391308 210 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 MIR208B-201ENST00000401172 77 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 AC245028.1-201ENST00000423259 256 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF144AP50876 SCARNA10-201ENST00000459255 330 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF144AP50876 RNU6-589P-201ENST00000516485 107 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF144AP50876 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF144AP50876 CYP4A27P-201ENST00000567218 190 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 AC023043.3-201ENST00000593113 385 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF144AP50876 AC012468.1-201ENST00000604888 430 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 MIR7155-201ENST00000615925 56 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 AC087385.3-201ENST00000620477 187 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF144AP50876 MIR3529-201ENST00000637713 78 ntBASIC4.44□□□□□ -1.7
RNF144AP50876 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF144AP50876 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF144AP50876 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
RNF144AP50876 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF144AP50876 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF144AP50876 INTS6P1-201ENST00000504674 2530 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RNF144AP50876 ADAM3A-203ENST00000461344 2157 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF144AP50876 RN7SKP280-201ENST00000364196 304 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 RNU6-147P-201ENST00000383983 107 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF144AP50876 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF144AP50876 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF144AP50876 RPS27P1-201ENST00000450552 247 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 RN7SL610P-201ENST00000463845 291 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 RN7SL329P-201ENST00000467740 299 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF144AP50876 RN7SL558P-201ENST00000497468 299 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 RNU6-1282P-201ENST00000516735 96 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF144AP50876 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF144AP50876 RN7SL52P-201ENST00000584271 284 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF144AP50876 AL451007.1-201ENST00000595491 289 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 AC068870.2-201ENST00000620635 389 ntBASIC4.43□□□□□ -1.7
RNF144AP50876 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF144AP50876 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF144AP50876 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF144AP50876 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF144AP50876 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF144AP50876 AL136164.4-201ENST00000625013 2135 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF144AP50876 RNU6-1205P-201ENST00000363625 106 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 RNU6-915P-201ENST00000364943 103 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 RNU6-728P-201ENST00000365375 104 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 RNU6-1228P-201ENST00000391014 107 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 U3.26-201ENST00000391236 204 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 AL645927.1-201ENST00000396783 406 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 RPL21P17-201ENST00000397467 475 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 AL606845.1-201ENST00000404881 255 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 RNA5SP390-201ENST00000410191 113 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 BX510359.2-201ENST00000417920 305 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF144AP50876 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF144AP50876 AL049745.1-201ENST00000433953 286 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF144AP50876 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF144AP50876 RPL31P41-201ENST00000477967 372 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 AC091868.1-201ENST00000508746 304 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 RNU6-581P-201ENST00000516214 105 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 RNU6-561P-201ENST00000516222 102 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 AC134698.5-201ENST00000519444 336 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 AC011471.1-201ENST00000585766 187 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms