Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.64□□□□□ -1.51
PRIM1P49642 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.64□□□□□ -1.51
PRIM1P49642 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PRIM1P49642 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PRIM1P49642 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRIM1P49642 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PRIM1P49642 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRIM1P49642 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRIM1P49642 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRIM1P49642 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PRIM1P49642 Y_RNA.43-201ENST00000362670 111 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 Y_RNA.333-201ENST00000365274 102 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 RNU6-1181P-201ENST00000384191 106 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 RPL26P27-201ENST00000414397 437 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 AC138623.1-201ENST00000418060 216 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.63□□□□□ -1.51
PRIM1P49642 RNU6-1211P-201ENST00000459179 105 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 RPL35AP15-201ENST00000468042 339 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 RPS4XP13-201ENST00000483219 789 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 FAM27D1-201ENST00000612308 341 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 AL021997.2-201ENST00000615674 271 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 AC092628.2-201ENST00000622492 339 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 AC008873.1-201ENST00000625051 138 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRIM1P49642 ASNSP1-201ENST00000518311 1939 ntBASIC5.63□□□□□ -1.51
PRIM1P49642 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRIM1P49642 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.63□□□□□ -1.51
PRIM1P49642 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRIM1P49642 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.62□□□□□ -1.51
PRIM1P49642 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PRIM1P49642 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PRIM1P49642 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PRIM1P49642 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PRIM1P49642 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 RNU1-108P-201ENST00000362556 161 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 RNU6-793P-201ENST00000384233 104 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 Y_RNA.563-201ENST00000384707 108 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 MIR518D-201ENST00000385014 87 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 MIR195-201ENST00000385194 87 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 AL445584.1-201ENST00000431451 330 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.62□□□□□ -1.51
PRIM1P49642 RPL37P4-201ENST00000448908 268 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 RN7SL812P-201ENST00000493791 279 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.62□□□□□ -1.51
PRIM1P49642 RNU4-57P-201ENST00000515980 135 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 RNA5SP272-201ENST00000516095 111 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.62□□□□□ -1.51
PRIM1P49642 AC022616.8-201ENST00000533569 253 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 AC112693.2-201ENST00000556538 232 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.62□□□□□ -1.51
PRIM1P49642 MIR3145-201ENST00000580727 82 ntBASIC5.62□□□□□ -1.51
PRIM1P49642 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PRIM1P49642 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PRIM1P49642 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.62□□□□□ -1.51
PRIM1P49642 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PRIM1P49642 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PRIM1P49642 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PRIM1P49642 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PRIM1P49642 AC107068.1-201ENST00000563286 4218 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PRIM1P49642 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PRIM1P49642 Y_RNA.101-201ENST00000363154 102 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 RNA5SP175-201ENST00000364275 119 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 RNU6-335P-201ENST00000364563 113 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 RNA5SP475-201ENST00000410568 110 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 AC074117.2-201ENST00000417130 397 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 BPY2DP-201ENST00000422208 265 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 FTH1P6-201ENST00000430768 320 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 AC007969.2-201ENST00000441891 191 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 IFITM8P-201ENST00000522529 394 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.61□□□□□ -1.51
PRIM1P49642 DEFB117-201ENST00000602356 141 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 CR392039.5-201ENST00000623201 510 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.61□□□□□ -1.51
PRIM1P49642 AC012442.3-202ENST00000636742 206 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 MAPK10-304ENST00000641341 3984 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.61□□□□□ -1.51
PRIM1P49642 OR51H2P-202ENST00000641424 3046 ntBASIC5.61□□□□□ -1.51
PRIM1P49642 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PRIM1P49642 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.6□□□□□ -1.51
PRIM1P49642 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.6□□□□□ -1.51
PRIM1P49642 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRIM1P49642 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PRIM1P49642 AC008079.2-201ENST00000623543 20396 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 SNORD56.1-201ENST00000362913 68 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 RNU6ATAC-201ENST00000408749 126 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 AC009963.1-201ENST00000417265 157 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.6□□□□□ -1.51
PRIM1P49642 PTGES3P4-201ENST00000426243 356 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 AC010285.1-201ENST00000470580 392 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.6□□□□□ -1.51
PRIM1P49642 SNORA72.7-201ENST00000516349 94 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 CYCSP26-201ENST00000534107 320 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.6□□□□□ -1.51
PRIM1P49642 AC091932.3-201ENST00000624223 323 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms