Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX1P47902 SEPT14P2-201ENST00000453405 183 ntBASIC2.32□□□□□ -2.04
CDX1P47902 AC117440.1-201ENST00000474107 571 ntBASIC2.32□□□□□ -2.04
CDX1P47902 AC097462.2-201ENST00000504623 481 ntBASIC2.32□□□□□ -2.04
CDX1P47902 SEPT14P4-201ENST00000513445 186 ntBASIC2.32□□□□□ -2.04
CDX1P47902 RNU2-53P-201ENST00000516257 147 ntBASIC2.32□□□□□ -2.04
CDX1P47902 RNU6-720P-201ENST00000516363 108 ntBASIC2.32□□□□□ -2.04
CDX1P47902 RNU6-835P-201ENST00000516974 104 ntBASIC2.32□□□□□ -2.04
CDX1P47902 FO082796.1-201ENST00000523795 183 ntBASIC2.32□□□□□ -2.04
CDX1P47902 CYCSP27-201ENST00000527643 293 ntBASIC2.32□□□□□ -2.04
CDX1P47902 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX1P47902 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX1P47902 MIR4446-201ENST00000578505 67 ntBASIC2.32□□□□□ -2.04
CDX1P47902 RPL30P11-203ENST00000598995 310 ntBASIC2.32□□□□□ -2.04
CDX1P47902 AL162413.1-201ENST00000603198 110 ntBASIC2.32□□□□□ -2.04
CDX1P47902 AL138963.2-201ENST00000605137 226 ntBASIC2.32□□□□□ -2.04
CDX1P47902 RNU6-85P-201ENST00000605989 107 ntBASIC2.32□□□□□ -2.04
CDX1P47902 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CDX1P47902 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.32□□□□□ -2.04
CDX1P47902 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDX1P47902 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.32□□□□□ -2.04
CDX1P47902 Y_RNA.3-201ENST00000362331 103 ntBASIC2.31□□□□□ -2.04
CDX1P47902 RNU6-212P-201ENST00000362642 104 ntBASIC2.31□□□□□ -2.04
CDX1P47902 RNU6-38P-201ENST00000384085 107 ntBASIC2.31□□□□□ -2.04
CDX1P47902 MIR544A-201ENST00000384855 91 ntBASIC2.31□□□□□ -2.04
CDX1P47902 EEF1A1P41-201ENST00000414667 207 ntBASIC2.31□□□□□ -2.04
CDX1P47902 AC003685.2-201ENST00000422795 395 ntBASIC2.31□□□□□ -2.04
CDX1P47902 AC236972.1-201ENST00000433225 199 ntBASIC2.31□□□□□ -2.04
CDX1P47902 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX1P47902 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.31□□□□□ -2.04
CDX1P47902 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.31□□□□□ -2.04
CDX1P47902 MTND3P16-201ENST00000452205 344 ntBASIC2.31□□□□□ -2.04
CDX1P47902 CYP2C59P-201ENST00000457790 269 ntBASIC2.31□□□□□ -2.04
CDX1P47902 RNU6-333P-201ENST00000459117 107 ntBASIC2.31□□□□□ -2.04
CDX1P47902 RPL21P99-201ENST00000480369 423 ntBASIC2.31□□□□□ -2.04
CDX1P47902 RN7SL20P-201ENST00000488827 297 ntBASIC2.31□□□□□ -2.04
CDX1P47902 AC091435.1-201ENST00000505442 584 ntBASIC2.31□□□□□ -2.04
CDX1P47902 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX1P47902 HIGD1AP13-201ENST00000509878 289 ntBASIC2.31□□□□□ -2.04
CDX1P47902 RNU6-189P-201ENST00000516120 101 ntBASIC2.31□□□□□ -2.04
CDX1P47902 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CDX1P47902 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX1P47902 OR11H5P-201ENST00000554039 926 ntBASIC2.31□□□□□ -2.04
CDX1P47902 AL133241.1-201ENST00000556832 487 ntBASIC2.31□□□□□ -2.04
CDX1P47902 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX1P47902 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX1P47902 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX1P47902 AC060766.3-201ENST00000591442 263 ntBASIC2.31□□□□□ -2.04
CDX1P47902 VN1R80P-201ENST00000597126 338 ntBASIC2.31□□□□□ -2.04
CDX1P47902 AL355297.2-201ENST00000604792 129 ntBASIC2.31□□□□□ -2.04
CDX1P47902 ATP5A1P2-202ENST00000616464 443 ntBASIC2.31□□□□□ -2.04
CDX1P47902 AC139792.2-201ENST00000624218 587 ntBASIC2.31□□□□□ -2.04
CDX1P47902 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX1P47902 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX1P47902 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDX1P47902 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX1P47902 AL035425.3-201ENST00000564206 4996 ntBASIC2.3□□□□□ -2.04
CDX1P47902 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CDX1P47902 AC080100.1-201ENST00000624239 5356 ntBASIC2.3□□□□□ -2.04
CDX1P47902 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDX1P47902 AC096644.4-201ENST00000563417 2912 ntBASIC2.3□□□□□ -2.04
CDX1P47902 AC073325.2-201ENST00000339545 159 ntBASIC2.3□□□□□ -2.04
CDX1P47902 RNA5SP240-201ENST00000365355 128 ntBASIC2.3□□□□□ -2.04
CDX1P47902 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDX1P47902 RNA5SP181-201ENST00000410246 98 ntBASIC2.3□□□□□ -2.04
CDX1P47902 RNU2-23P-201ENST00000410545 195 ntBASIC2.3□□□□□ -2.04
CDX1P47902 RNU6-293P-201ENST00000411259 106 ntBASIC2.3□□□□□ -2.04
CDX1P47902 POLHP1-201ENST00000411806 470 ntBASIC2.3□□□□□ -2.04
CDX1P47902 RPLP0P7-201ENST00000416050 667 ntBASIC2.3□□□□□ -2.04
CDX1P47902 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX1P47902 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX1P47902 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDX1P47902 AC107083.1-201ENST00000439643 279 ntBASIC2.3□□□□□ -2.04
CDX1P47902 RPL39P29-201ENST00000447779 157 ntBASIC2.3□□□□□ -2.04
CDX1P47902 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX1P47902 AC091885.1-201ENST00000506658 268 ntBASIC2.3□□□□□ -2.04
CDX1P47902 AF213884.2-201ENST00000510417 903 ntBASIC2.3□□□□□ -2.04
CDX1P47902 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX1P47902 SNORA31.11-201ENST00000516528 139 ntBASIC2.3□□□□□ -2.04
CDX1P47902 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX1P47902 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.3□□□□□ -2.04
CDX1P47902 CENPUP1-201ENST00000526649 1202 ntBASIC2.3□□□□□ -2.04
CDX1P47902 HPRT1P3-201ENST00000539521 576 ntBASIC2.3□□□□□ -2.04
CDX1P47902 AC090115.3-201ENST00000553218 849 ntBASIC2.3□□□□□ -2.04
CDX1P47902 EIF4BP1-201ENST00000554881 351 ntBASIC2.3□□□□□ -2.04
CDX1P47902 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX1P47902 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.3□□□□□ -2.04
CDX1P47902 AC092747.3-201ENST00000603769 301 ntBASIC2.3□□□□□ -2.04
CDX1P47902 AC107304.1-201ENST00000604229 296 ntBASIC2.3□□□□□ -2.04
CDX1P47902 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.3□□□□□ -2.04
CDX1P47902 YWHAEP7-203ENST00000622054 312 ntBASIC2.3□□□□□ -2.04
CDX1P47902 AC002543.1-201ENST00000299783 1954 ntBASIC2.3□□□□□ -2.04
CDX1P47902 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDX1P47902 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CDX1P47902 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CDX1P47902 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDX1P47902 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.29□□□□□ -2.04
CDX1P47902 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.29□□□□□ -2.04
CDX1P47902 RNU6-655P-201ENST00000362858 107 ntBASIC2.29□□□□□ -2.04
CDX1P47902 RNU6-428P-201ENST00000362942 107 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms