Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 Y_RNA.2-201ENST00000362330 96 ntBASIC3.2□□□□□ -1.9
MMP13P45452 RNU6-490P-201ENST00000362985 107 ntBASIC3.2□□□□□ -1.9
MMP13P45452 SNORA63.7-201ENST00000365579 123 ntBASIC3.2□□□□□ -1.9
MMP13P45452 RNU6-1329P-201ENST00000365664 107 ntBASIC3.2□□□□□ -1.9
MMP13P45452 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP13P45452 Y_RNA.401-201ENST00000383965 117 ntBASIC3.2□□□□□ -1.9
MMP13P45452 Y_RNA.455-201ENST00000384230 98 ntBASIC3.2□□□□□ -1.9
MMP13P45452 RNU6-1222P-201ENST00000384615 107 ntBASIC3.2□□□□□ -1.9
MMP13P45452 MIR517A-201ENST00000385001 87 ntBASIC3.2□□□□□ -1.9
MMP13P45452 RNA5SP344-201ENST00000411081 104 ntBASIC3.2□□□□□ -1.9
MMP13P45452 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.2□□□□□ -1.9
MMP13P45452 NUP35P1-201ENST00000422734 947 ntBASIC3.2□□□□□ -1.9
MMP13P45452 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP13P45452 UBE2D3P2-201ENST00000424409 445 ntBASIC3.2□□□□□ -1.9
MMP13P45452 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.2□□□□□ -1.9
MMP13P45452 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MMP13P45452 AL592045.1-201ENST00000429867 352 ntBASIC3.2□□□□□ -1.9
MMP13P45452 AC010655.3-201ENST00000478818 450 ntBASIC3.2□□□□□ -1.9
MMP13P45452 AP004217.1-201ENST00000480579 346 ntBASIC3.2□□□□□ -1.9
MMP13P45452 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP13P45452 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.2□□□□□ -1.9
MMP13P45452 AC108860.1-201ENST00000484521 383 ntBASIC3.2□□□□□ -1.9
MMP13P45452 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP13P45452 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP13P45452 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.2□□□□□ -1.9
MMP13P45452 RNU6-840P-201ENST00000517275 65 ntBASIC3.2□□□□□ -1.9
MMP13P45452 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
MMP13P45452 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP13P45452 U4.1-201ENST00000620349 87 ntBASIC3.2□□□□□ -1.9
MMP13P45452 AL031601.2-202ENST00000622650 282 ntBASIC3.2□□□□□ -1.9
MMP13P45452 AC018692.3-201ENST00000623929 123 ntBASIC3.2□□□□□ -1.9
MMP13P45452 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.2□□□□□ -1.9
MMP13P45452 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
MMP13P45452 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.2□□□□□ -1.9
MMP13P45452 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MMP13P45452 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.2□□□□□ -1.9
MMP13P45452 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
MMP13P45452 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MMP13P45452 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MMP13P45452 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.19□□□□□ -1.9
MMP13P45452 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
MMP13P45452 AC005592.1-201ENST00000566527 1640 ntBASIC3.19□□□□□ -1.9
MMP13P45452 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MMP13P45452 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MMP13P45452 Y_RNA.48-201ENST00000362710 103 ntBASIC3.19□□□□□ -1.9
MMP13P45452 SNORA38.1-201ENST00000364172 131 ntBASIC3.19□□□□□ -1.9
MMP13P45452 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.19□□□□□ -1.9
MMP13P45452 SNORA7.4-201ENST00000384249 137 ntBASIC3.19□□□□□ -1.9
MMP13P45452 Y_RNA.574-201ENST00000384766 95 ntBASIC3.19□□□□□ -1.9
MMP13P45452 U3.42-201ENST00000408746 214 ntBASIC3.19□□□□□ -1.9
MMP13P45452 RNU6-607P-201ENST00000411283 108 ntBASIC3.19□□□□□ -1.9
MMP13P45452 AC096664.2-201ENST00000411843 406 ntBASIC3.19□□□□□ -1.9
MMP13P45452 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.19□□□□□ -1.9
MMP13P45452 RPL21P2-201ENST00000440049 481 ntBASIC3.19□□□□□ -1.9
MMP13P45452 AL353752.1-201ENST00000454946 260 ntBASIC3.19□□□□□ -1.9
MMP13P45452 BX510359.1-201ENST00000456973 237 ntBASIC3.19□□□□□ -1.9
MMP13P45452 RNU7-138P-201ENST00000459479 64 ntBASIC3.19□□□□□ -1.9
MMP13P45452 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.19□□□□□ -1.9
MMP13P45452 AC105758.1-201ENST00000506038 399 ntBASIC3.19□□□□□ -1.9
MMP13P45452 RNU6-635P-201ENST00000516651 102 ntBASIC3.19□□□□□ -1.9
MMP13P45452 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.19□□□□□ -1.9
MMP13P45452 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.19□□□□□ -1.9
MMP13P45452 LRRC37A5P-203ENST00000580181 585 ntBASIC3.19□□□□□ -1.9
MMP13P45452 AC012468.1-201ENST00000604888 430 ntBASIC3.19□□□□□ -1.9
MMP13P45452 AC007179.3-201ENST00000604976 235 ntBASIC3.19□□□□□ -1.9
MMP13P45452 AC008962.1-201ENST00000605729 304 ntBASIC3.19□□□□□ -1.9
MMP13P45452 RNU6-85P-201ENST00000605989 107 ntBASIC3.19□□□□□ -1.9
MMP13P45452 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.19□□□□□ -1.9
MMP13P45452 Z99571.1-201ENST00000636677 394 ntBASIC3.19□□□□□ -1.9
MMP13P45452 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MMP13P45452 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MMP13P45452 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MMP13P45452 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MMP13P45452 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
MMP13P45452 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
MMP13P45452 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
MMP13P45452 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.18□□□□□ -1.9
MMP13P45452 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
MMP13P45452 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
MMP13P45452 Y_RNA.106-201ENST00000363189 100 ntBASIC3.18□□□□□ -1.9
MMP13P45452 RNU6-238P-201ENST00000363313 106 ntBASIC3.18□□□□□ -1.9
MMP13P45452 Y_RNA.149-201ENST00000363558 117 ntBASIC3.18□□□□□ -1.9
MMP13P45452 MIR181B1-201ENST00000385240 110 ntBASIC3.18□□□□□ -1.9
MMP13P45452 RNU6-823P-201ENST00000391042 103 ntBASIC3.18□□□□□ -1.9
MMP13P45452 MIR1302-3-201ENST00000408128 138 ntBASIC3.18□□□□□ -1.9
MMP13P45452 RNU6-1077P-201ENST00000410506 102 ntBASIC3.18□□□□□ -1.9
MMP13P45452 BX276092.3-201ENST00000424182 230 ntBASIC3.18□□□□□ -1.9
MMP13P45452 RPL27AP8-201ENST00000424277 446 ntBASIC3.18□□□□□ -1.9
MMP13P45452 AL645568.3-201ENST00000433683 316 ntBASIC3.18□□□□□ -1.9
MMP13P45452 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.18□□□□□ -1.9
MMP13P45452 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.18□□□□□ -1.9
MMP13P45452 HMGN2P13-201ENST00000476476 274 ntBASIC3.18□□□□□ -1.9
MMP13P45452 HSPE1P6-201ENST00000479457 291 ntBASIC3.18□□□□□ -1.9
MMP13P45452 RN7SL504P-201ENST00000494496 287 ntBASIC3.18□□□□□ -1.9
MMP13P45452 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.18□□□□□ -1.9
MMP13P45452 AC113155.1-201ENST00000511141 769 ntBASIC3.18□□□□□ -1.9
MMP13P45452 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.18□□□□□ -1.9
MMP13P45452 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.18□□□□□ -1.9
MMP13P45452 MIR5004-201ENST00000579078 107 ntBASIC3.18□□□□□ -1.9
MMP13P45452 UBL5P2-201ENST00000583788 219 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms