Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC011742.1-201ENST00000431448 434 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RPL23AP81-201ENST00000455252 467 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNU6-1132P-201ENST00000459214 107 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 AC087477.1-201ENST00000465747 340 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RPS29P19-201ENST00000479709 171 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 AC025445.1-201ENST00000502728 300 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNA5SP154-201ENST00000516193 111 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNU6-388P-201ENST00000517012 105 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNU6-389P-201ENST00000517048 105 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNU6-570P-201ENST00000517051 105 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 AP002770.2-201ENST00000543613 532 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 HSPE1P4-201ENST00000550617 308 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXC12P31275 RPL23AP97-201ENST00000568955 471 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 AL355877.2-201ENST00000603670 358 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 MIR6867-201ENST00000610636 67 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RMST_6.1-201ENST00000611980 203 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 FAM27D1-201ENST00000612308 341 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXC12P31275 MIR3529-201ENST00000637713 78 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC12P31275 LINC02471-203ENST00000641941 4752 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC12P31275 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXC12P31275 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXC12P31275 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.76□□□□□ -1.81
HOXC12P31275 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC12P31275 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC12P31275 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXC12P31275 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HOXC12P31275 AL353743.1-202ENST00000431724 1695 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXC12P31275 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXC12P31275 RNU6-222P-201ENST00000362438 107 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 RNA5SP387-201ENST00000364226 106 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 Y_RNA.447-201ENST00000384184 113 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 RNU6-843P-201ENST00000384454 104 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 MIR195-201ENST00000385194 87 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 AP000907.1-201ENST00000428428 510 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXC12P31275 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HOXC12P31275 SSXP4-201ENST00000451349 245 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXC12P31275 SNORD127-201ENST00000458892 86 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 U3.44-201ENST00000458938 192 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HOXC12P31275 AF186996.7-201ENST00000492781 209 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 RNU5F-8P-201ENST00000515941 111 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 ACA59.2-201ENST00000517061 156 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
HOXC12P31275 AC023157.2-201ENST00000540596 141 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXC12P31275 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXC12P31275 MIR3944-201ENST00000581277 108 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 AC005357.1-201ENST00000588399 301 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 U6.92-201ENST00000636464 89 ntBASIC3.75□□□□□ -1.81
HOXC12P31275 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HOXC12P31275 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXC12P31275 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXC12P31275 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXC12P31275 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXC12P31275 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HOXC12P31275 SNORA71.3-201ENST00000362582 128 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 RNU1-14P-201ENST00000362759 152 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 Y_RNA.105-201ENST00000363182 111 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 RNU1-20P-201ENST00000363314 162 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 RNA5SP151-201ENST00000365632 117 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 Y_RNA.439-201ENST00000384119 94 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 RNY3P4-201ENST00000384428 101 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 MIR153-2-201ENST00000385225 87 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXC12P31275 RPL23AP95-201ENST00000426806 265 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 AC091286.1-201ENST00000431233 461 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 GPM6BP3-201ENST00000442797 145 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 RPL32P34-201ENST00000486380 400 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 AC067942.3-201ENST00000512025 362 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 RNA5SP519-201ENST00000516480 119 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXC12P31275 AC006064.5-201ENST00000541782 248 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXC12P31275 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXC12P31275 MTND6P33-201ENST00000571794 183 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 RN7SL600P-201ENST00000581811 299 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 AC008739.3-201ENST00000603262 127 ntBASIC3.74□□□□□ -1.81
HOXC12P31275 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXC12P31275 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HOXC12P31275 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.74□□□□□ -1.81
HOXC12P31275 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC12P31275 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC12P31275 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC12P31275 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
HOXC12P31275 AC004944.1-201ENST00000517807 3059 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXC12P31275 HSPA8P1-201ENST00000425843 1833 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AC007496.3-201ENST00000624987 3443 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 SNORD115-32-201ENST00000364079 82 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 SNORD46.1-201ENST00000364139 104 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms