Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 Y_RNA.389-201ENST00000383924 113 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 Y_RNA.424-201ENST00000384063 103 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ERCC3P19447 RPS29P4-201ENST00000414733 161 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.42□□□□□ -1.7
ERCC3P19447 MTCO3P29-201ENST00000432119 779 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 AC007969.2-201ENST00000441891 191 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 RPL39P29-201ENST00000447779 157 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 AL353752.1-201ENST00000454946 260 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 RPS26P21-201ENST00000475397 348 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 RPL31P61-201ENST00000496160 376 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 SNORD19.2-201ENST00000516978 73 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 RNU6-1137P-201ENST00000517073 99 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 AC144568.1-201ENST00000520139 137 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 AC022695.1-201ENST00000522089 237 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.42□□□□□ -1.7
ERCC3P19447 AC105137.2-201ENST00000569073 466 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 MIR4680-201ENST00000580906 66 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.42□□□□□ -1.7
ERCC3P19447 AL132822.1-201ENST00000617063 513 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 AL162373.1-201ENST00000620433 407 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ERCC3P19447 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.41□□□□□ -1.7
ERCC3P19447 AC091812.1-201ENST00000432235 1948 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
ERCC3P19447 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ERCC3P19447 RNU6-142P-201ENST00000384019 107 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.41□□□□□ -1.7
ERCC3P19447 AL138885.1-201ENST00000405921 675 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 RNU6-1140P-201ENST00000410517 106 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC3P19447 EIF1AXP1-201ENST00000419267 435 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC3P19447 GPM6BP3-201ENST00000442797 145 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 AL513124.1-201ENST00000450410 614 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC3P19447 RN7SKP210-201ENST00000459176 261 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.41□□□□□ -1.7
ERCC3P19447 RNU7-175P-201ENST00000515915 61 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.41□□□□□ -1.7
ERCC3P19447 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC3P19447 MIR5187-201ENST00000583479 76 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 MIR3922-201ENST00000585192 84 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 MIR486-1-201ENST00000612171 68 ntBASIC4.41□□□□□ -1.7
ERCC3P19447 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.41□□□□□ -1.7
ERCC3P19447 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.41□□□□□ -1.7
ERCC3P19447 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ERCC3P19447 AC010680.1-201ENST00000590024 3590 ntBASIC4.4□□□□□ -1.7
ERCC3P19447 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.4□□□□□ -1.7
ERCC3P19447 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERCC3P19447 Y_RNA.405-201ENST00000383979 100 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 Y_RNA.451-201ENST00000384200 100 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 Y_RNA.524-201ENST00000384564 100 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 Y_RNA.561-201ENST00000384694 100 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 MIR183-201ENST00000384958 110 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 MIR34B-201ENST00000385076 84 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 MIR628-201ENST00000385229 95 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 RNU6-750P-201ENST00000390946 107 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.4□□□□□ -1.71
ERCC3P19447 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.4□□□□□ -1.71
ERCC3P19447 AC106707.2-201ENST00000484182 374 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 Y_RNA.706-201ENST00000516933 99 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 Y_RNA.720-201ENST00000517166 92 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.4□□□□□ -1.71
ERCC3P19447 AC096577.2-201ENST00000611455 153 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.4□□□□□ -1.71
ERCC3P19447 AL606534.2-204ENST00000635008 178 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 U6.105-201ENST00000637379 88 ntBASIC4.4□□□□□ -1.71
ERCC3P19447 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.4□□□□□ -1.71
ERCC3P19447 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
ERCC3P19447 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
ERCC3P19447 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ERCC3P19447 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ERCC3P19447 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
ERCC3P19447 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ERCC3P19447 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC3P19447 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC3P19447 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.39□□□□□ -1.71
ERCC3P19447 RNU6-212P-201ENST00000362642 104 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 SNORA9-201ENST00000384215 133 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 RNU6-748P-201ENST00000384648 107 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 MIR199A2-201ENST00000385289 110 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 AC096649.2-201ENST00000416186 393 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC3P19447 HMGB1P37-201ENST00000439613 609 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.39□□□□□ -1.71
ERCC3P19447 SNORD59.2-201ENST00000516873 68 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 RNU6-1231P-201ENST00000517185 103 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC3P19447 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC3P19447 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.39□□□□□ -1.71
ERCC3P19447 GNAI2P1-201ENST00000541815 315 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 GNRHR2P1-201ENST00000555315 631 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.39□□□□□ -1.71
ERCC3P19447 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC3P19447 AC006600.1-201ENST00000572529 153 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 AC060766.3-201ENST00000591442 263 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 AC136443.5-201ENST00000603741 370 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 U3.45-201ENST00000607547 219 ntBASIC4.39□□□□□ -1.71
ERCC3P19447 TNPO1P3-201ENST00000436471 2662 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms