Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.22□□□□□ -1.73
NID1P14543 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
NID1P14543 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NID1P14543 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NID1P14543 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.21□□□□□ -1.73
NID1P14543 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NID1P14543 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.21□□□□□ -1.74
NID1P14543 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
NID1P14543 AL590240.1-201ENST00000334118 313 ntBASIC4.21□□□□□ -1.74
NID1P14543 RNU1-20P-201ENST00000363314 162 ntBASIC4.21□□□□□ -1.74
NID1P14543 Y_RNA.309-201ENST00000365046 111 ntBASIC4.21□□□□□ -1.74
NID1P14543 RNU6-793P-201ENST00000384233 104 ntBASIC4.21□□□□□ -1.74
NID1P14543 MIR626-201ENST00000385032 94 ntBASIC4.21□□□□□ -1.74
NID1P14543 SDHCP2-201ENST00000398565 501 ntBASIC4.21□□□□□ -1.74
NID1P14543 RNA5SP475-201ENST00000410568 110 ntBASIC4.21□□□□□ -1.74
NID1P14543 RN7SKP53-201ENST00000411337 315 ntBASIC4.21□□□□□ -1.74
NID1P14543 ELOCP21-201ENST00000412558 336 ntBASIC4.21□□□□□ -1.74
NID1P14543 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NID1P14543 RPL21P66-201ENST00000426566 466 ntBASIC4.21□□□□□ -1.74
NID1P14543 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.21□□□□□ -1.74
NID1P14543 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.21□□□□□ -1.74
NID1P14543 RPL23AP14-201ENST00000468281 468 ntBASIC4.21□□□□□ -1.74
NID1P14543 RN7SL817P-201ENST00000480777 288 ntBASIC4.21□□□□□ -1.74
NID1P14543 AC108145.1-201ENST00000503770 153 ntBASIC4.21□□□□□ -1.74
NID1P14543 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.21□□□□□ -1.74
NID1P14543 AC026402.1-201ENST00000513642 170 ntBASIC4.21□□□□□ -1.74
NID1P14543 RNA5SP360-201ENST00000516555 118 ntBASIC4.21□□□□□ -1.74
NID1P14543 AP001328.1-201ENST00000528550 176 ntBASIC4.21□□□□□ -1.74
NID1P14543 AC090049.2-201ENST00000550377 109 ntBASIC4.21□□□□□ -1.74
NID1P14543 AC021231.3-201ENST00000558497 370 ntBASIC4.21□□□□□ -1.74
NID1P14543 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.21□□□□□ -1.74
NID1P14543 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.21□□□□□ -1.74
NID1P14543 MIR4277-201ENST00000578298 84 ntBASIC4.21□□□□□ -1.74
NID1P14543 MIR5096-201ENST00000583713 70 ntBASIC4.21□□□□□ -1.74
NID1P14543 AC020895.1-201ENST00000595362 272 ntBASIC4.21□□□□□ -1.74
NID1P14543 AC136601.2-201ENST00000604356 474 ntBASIC4.21□□□□□ -1.74
NID1P14543 AC013791.1-201ENST00000616619 62 ntBASIC4.21□□□□□ -1.74
NID1P14543 BMS1P21-201ENST00000634565 365 ntBASIC4.21□□□□□ -1.74
NID1P14543 MIR3674-201ENST00000636576 68 ntBASIC4.21□□□□□ -1.74
NID1P14543 AL139811.1-201ENST00000424779 2299 ntBASIC4.21□□□□□ -1.74
NID1P14543 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NID1P14543 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NID1P14543 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.21□□□□□ -1.74
NID1P14543 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NID1P14543 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NID1P14543 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.2□□□□□ -1.74
NID1P14543 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.2□□□□□ -1.74
NID1P14543 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NID1P14543 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
NID1P14543 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NID1P14543 RNU6-324P-201ENST00000363957 106 ntBASIC4.2□□□□□ -1.74
NID1P14543 RNU6-1141P-201ENST00000364520 107 ntBASIC4.2□□□□□ -1.74
NID1P14543 Y_RNA.293-201ENST00000364908 93 ntBASIC4.2□□□□□ -1.74
NID1P14543 Z98749.2-208ENST00000381646 500 ntBASIC4.2□□□□□ -1.74
NID1P14543 MIR518D-201ENST00000385014 87 ntBASIC4.2□□□□□ -1.74
NID1P14543 RNA5SP372-201ENST00000390836 115 ntBASIC4.2□□□□□ -1.74
NID1P14543 RNU6-460P-201ENST00000391158 108 ntBASIC4.2□□□□□ -1.74
NID1P14543 RN7SKP61-201ENST00000410642 295 ntBASIC4.2□□□□□ -1.74
NID1P14543 RPS26P42-201ENST00000413485 326 ntBASIC4.2□□□□□ -1.74
NID1P14543 AC009237.10-201ENST00000414112 510 ntBASIC4.2□□□□□ -1.74
NID1P14543 AC007969.2-201ENST00000441891 191 ntBASIC4.2□□□□□ -1.74
NID1P14543 RNU7-107P-201ENST00000459121 61 ntBASIC4.2□□□□□ -1.74
NID1P14543 RN7SL41P-201ENST00000476144 297 ntBASIC4.2□□□□□ -1.74
NID1P14543 RNU2-56P-201ENST00000516826 190 ntBASIC4.2□□□□□ -1.74
NID1P14543 SNORA31.20-201ENST00000517111 133 ntBASIC4.2□□□□□ -1.74
NID1P14543 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NID1P14543 NACAP3-201ENST00000552100 481 ntBASIC4.2□□□□□ -1.74
NID1P14543 U7.2-201ENST00000607576 63 ntBASIC4.2□□□□□ -1.74
NID1P14543 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.2□□□□□ -1.74
NID1P14543 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.2□□□□□ -1.74
NID1P14543 AC091905.2-201ENST00000623143 306 ntBASIC4.2□□□□□ -1.74
NID1P14543 AP001340.1-201ENST00000624405 217 ntBASIC4.2□□□□□ -1.74
NID1P14543 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.2□□□□□ -1.74
NID1P14543 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NID1P14543 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.2□□□□□ -1.74
NID1P14543 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NID1P14543 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NID1P14543 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NID1P14543 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.19□□□□□ -1.74
NID1P14543 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
NID1P14543 AF127577.6-201ENST00000623352 2191 ntBASIC4.19□□□□□ -1.74
NID1P14543 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NID1P14543 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NID1P14543 RNU6-1285P-201ENST00000363480 105 ntBASIC4.19□□□□□ -1.74
NID1P14543 RNU4-10P-201ENST00000364383 140 ntBASIC4.19□□□□□ -1.74
NID1P14543 RNA5SP151-201ENST00000365632 117 ntBASIC4.19□□□□□ -1.74
NID1P14543 SNORA22-201ENST00000383907 134 ntBASIC4.19□□□□□ -1.74
NID1P14543 MIR544A-201ENST00000384855 91 ntBASIC4.19□□□□□ -1.74
NID1P14543 RNA5SP397-201ENST00000391323 118 ntBASIC4.19□□□□□ -1.74
NID1P14543 RPS12P23-201ENST00000419579 400 ntBASIC4.19□□□□□ -1.74
NID1P14543 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.19□□□□□ -1.74
NID1P14543 AC092991.1-201ENST00000477176 376 ntBASIC4.19□□□□□ -1.74
NID1P14543 RNU5E-3P-201ENST00000515913 68 ntBASIC4.19□□□□□ -1.74
NID1P14543 RNU6-1007P-201ENST00000516586 107 ntBASIC4.19□□□□□ -1.74
NID1P14543 RNU6-703P-201ENST00000516946 107 ntBASIC4.19□□□□□ -1.74
NID1P14543 AP004371.1-201ENST00000525240 214 ntBASIC4.19□□□□□ -1.74
NID1P14543 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.19□□□□□ -1.74
NID1P14543 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NID1P14543 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NID1P14543 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms