Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 RNU6-937P-201ENST00000384325 106 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 MIR1251-201ENST00000408552 70 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 AL117339.3-201ENST00000418733 162 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 AC087650.1-201ENST00000431445 468 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 AC079354.2-201ENST00000453523 154 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 AC091021.1-201ENST00000468051 388 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 RPL7P47-201ENST00000497299 556 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 SEPT14P8-201ENST00000508026 178 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 RN7SKP18-201ENST00000516005 275 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 AC023824.2-201ENST00000566185 400 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 AL078605.1-201ENST00000603529 500 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 AC004852.3-201ENST00000614131 326 ntBASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CSB-PGBD3P0DP91 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 SCN1A-220ENST00000641603 12506 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 RNU6-1020P-201ENST00000363684 107 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 RNU6-1027P-201ENST00000383998 107 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 RNY3P4-201ENST00000384428 101 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 SETP5-201ENST00000437270 562 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 CYCSP35-201ENST00000451978 304 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 AL590705.4-201ENST00000532209 134 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 AC103996.1-201ENST00000555468 102 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 MIR4782-201ENST00000577987 79 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 AC072026.1-201ENST00000605023 201 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 FTX_3.1-201ENST00000610451 147 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 MIR8076-201ENST00000611401 83 ntBASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CSB-PGBD3P0DP91 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 Y_RNA.8-201ENST00000362353 102 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 RNU6-1290P-201ENST00000362957 109 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 U3.6-201ENST00000363622 211 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 Y_RNA.383-201ENST00000383855 97 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 RNU6-217P-201ENST00000384164 104 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 MIR218-2-201ENST00000385006 110 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 YPEL5P1-201ENST00000419731 367 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 AP000907.1-201ENST00000428428 510 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 HSPE1P25-201ENST00000455484 251 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 snoU109.2-201ENST00000459316 135 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 U8.21-201ENST00000459536 136 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 AK3P2-201ENST00000507976 429 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 AP001485.1-201ENST00000604799 199 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 Y_RNA.772-201ENST00000606692 102 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 AC240442.1-201ENST00000616055 283 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 MIR7975-201ENST00000619350 68 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 AC027309.3-201ENST00000623419 351 ntBASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.16□□□□□ -1.58
CSB-PGBD3P0DP91 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CSB-PGBD3P0DP91 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CSB-PGBD3P0DP91 Y_RNA.44-201ENST00000362676 108 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 RNU6-290P-201ENST00000365212 101 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 MIR708-201ENST00000390708 88 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 MTCYBP2-201ENST00000407745 171 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 RNU7-87P-201ENST00000459343 62 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 MRPL42P6-201ENST00000486397 371 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 RN7SL271P-201ENST00000487601 295 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 Y_RNA.662-201ENST00000516028 97 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 AC091144.1-201ENST00000519573 138 ntBASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.15□□□□□ -1.59
CSB-PGBD3P0DP91 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms