Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 RNU6-953P-201ENST00000459154 107 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 AC010409.1-201ENST00000487382 476 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 HMGB1P30-201ENST00000492455 606 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.91□□□□□ -2.26
UBBP0CG47 AC119751.4-201ENST00000507498 357 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.91□□□□□ -2.26
UBBP0CG47 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.91□□□□□ -2.26
UBBP0CG47 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.91□□□□□ -2.26
UBBP0CG47 AL356057.1-201ENST00000533798 831 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 CR383656.8-201ENST00000549046 145 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.91□□□□□ -2.26
UBBP0CG47 MIR3169-201ENST00000578032 83 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 AC078795.2-201ENST00000602835 1252 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 HSPE1P19-201ENST00000603327 295 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 CYP2C61P-201ENST00000604072 290 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 MIR15A-201ENST00000607334 83 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.91□□□□□ -2.26
UBBP0CG47 MIR1248-201ENST00000629190 106 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
UBBP0CG47 MTND5P9-201ENST00000503854 1755 ntBASIC0.91□□□□□ -2.26
UBBP0CG47 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
UBBP0CG47 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
UBBP0CG47 Y_RNA.99-201ENST00000363138 105 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 RNU6-271P-201ENST00000363858 105 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 RNU5E-6P-201ENST00000365574 115 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 RNU6-395P-201ENST00000365662 106 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 SNORA70.7-201ENST00000384159 133 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AL136310.1-201ENST00000404926 654 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AC069282.1-201ENST00000411911 526 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.9□□□□□ -2.27
UBBP0CG47 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.9□□□□□ -2.27
UBBP0CG47 DYNLT3P2-201ENST00000442517 295 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AL035666.1-201ENST00000446195 348 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.9□□□□□ -2.27
UBBP0CG47 RPL30P12-201ENST00000474666 353 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 MTCYBP40-201ENST00000509390 1135 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AC010587.2-201ENST00000511727 448 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.9□□□□□ -2.27
UBBP0CG47 RNU6-143P-201ENST00000516942 93 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 SNORA31.17-201ENST00000516953 127 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AC091163.3-201ENST00000518269 1144 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.9□□□□□ -2.27
UBBP0CG47 AP003122.4-201ENST00000530980 758 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.9□□□□□ -2.27
UBBP0CG47 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.9□□□□□ -2.27
UBBP0CG47 SUB1P4-201ENST00000566062 339 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AP000860.1-201ENST00000605250 559 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AL355802.3-201ENST00000607571 545 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AL355816.2-201ENST00000610049 647 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 PART1_2.1-201ENST00000612397 250 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 AL121890.5-201ENST00000620848 304 ntBASIC0.9□□□□□ -2.27
UBBP0CG47 Y_RNA.623-201ENST00000411128 95 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UBBP0CG47 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.89□□□□□ -2.27
UBBP0CG47 AC010095.1-201ENST00000443543 144 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.89□□□□□ -2.27
UBBP0CG47 GDI2P2-201ENST00000445131 608 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
UBBP0CG47 NDUFB1P2-201ENST00000449477 176 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 RPL30P6-201ENST00000475925 342 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 RPL30P7-201ENST00000479312 323 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 RPL30P1-201ENST00000488676 339 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 AC093259.1-201ENST00000509755 300 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 AC025465.3-201ENST00000510570 311 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 RNU6-965P-201ENST00000516721 96 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.89□□□□□ -2.27
UBBP0CG47 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.89□□□□□ -2.27
UBBP0CG47 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.89□□□□□ -2.27
UBBP0CG47 AC012065.4-201ENST00000602445 679 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 AC091965.4-201ENST00000607691 587 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 AL589994.2-201ENST00000621124 579 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 AC090517.3-201ENST00000625170 141 ntBASIC0.89□□□□□ -2.27
UBBP0CG47 RNU6-858P-201ENST00000362436 107 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 Y_RNA.46-201ENST00000362695 102 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 RNU6-723P-201ENST00000383973 107 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UBBP0CG47 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UBBP0CG47 AC138623.1-201ENST00000418060 216 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 RPS6P15-201ENST00000431996 751 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.88□□□□□ -2.27
UBBP0CG47 MTCO1P44-201ENST00000441935 243 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 AL358794.1-201ENST00000445689 381 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 RPL39P29-201ENST00000447779 157 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.88□□□□□ -2.27
UBBP0CG47 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.88□□□□□ -2.27
UBBP0CG47 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.88□□□□□ -2.27
UBBP0CG47 AL139824.2-201ENST00000458731 1095 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 RNU7-95P-201ENST00000459222 64 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.88□□□□□ -2.27
UBBP0CG47 AC112206.3-201ENST00000514578 389 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 RNU6-276P-201ENST00000516114 96 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 RNU6-677P-201ENST00000516914 101 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 RNU6-1092P-201ENST00000516955 87 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.88□□□□□ -2.27
UBBP0CG47 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
UBBP0CG47 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.88□□□□□ -2.27
UBBP0CG47 SNORA77B-201ENST00000578179 125 ntBASIC0.88□□□□□ -2.27
UBBP0CG47 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.88□□□□□ -2.27
UBBP0CG47 AL022345.1-201ENST00000607292 135 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms