Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
THBS1P07996 MIR6780A-201ENST00000615089 68 ntBASIC4.36□□□□□ -1.71
THBS1P07996 MIR3529-201ENST00000637713 78 ntBASIC4.36□□□□□ -1.71
THBS1P07996 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.36□□□□□ -1.71
THBS1P07996 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
THBS1P07996 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
THBS1P07996 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
THBS1P07996 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
THBS1P07996 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
THBS1P07996 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.36□□□□□ -1.71
THBS1P07996 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
THBS1P07996 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.35□□□□□ -1.71
THBS1P07996 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
THBS1P07996 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
THBS1P07996 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
THBS1P07996 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.35□□□□□ -1.71
THBS1P07996 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.35□□□□□ -1.71
THBS1P07996 Y_RNA.24-201ENST00000362508 103 ntBASIC4.35□□□□□ -1.71
THBS1P07996 Y_RNA.393-201ENST00000383936 102 ntBASIC4.35□□□□□ -1.71
THBS1P07996 SNORA75.5-201ENST00000391291 81 ntBASIC4.35□□□□□ -1.71
THBS1P07996 MIR888-201ENST00000401186 77 ntBASIC4.35□□□□□ -1.71
THBS1P07996 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.35□□□□□ -1.71
THBS1P07996 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
THBS1P07996 snoU13.4-201ENST00000458916 104 ntBASIC4.35□□□□□ -1.71
THBS1P07996 RPL23AP70-201ENST00000483361 460 ntBASIC4.35□□□□□ -1.71
THBS1P07996 SNORA31.8-201ENST00000516327 108 ntBASIC4.35□□□□□ -1.71
THBS1P07996 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.35□□□□□ -1.71
THBS1P07996 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.35□□□□□ -1.71
THBS1P07996 AC015912.2-201ENST00000571053 181 ntBASIC4.35□□□□□ -1.71
THBS1P07996 MIR7703-201ENST00000620784 77 ntBASIC4.35□□□□□ -1.71
THBS1P07996 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
THBS1P07996 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
THBS1P07996 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
THBS1P07996 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.35□□□□□ -1.71
THBS1P07996 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
THBS1P07996 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.35□□□□□ -1.71
THBS1P07996 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
THBS1P07996 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
THBS1P07996 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
THBS1P07996 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.34□□□□□ -1.71
THBS1P07996 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
THBS1P07996 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
THBS1P07996 RNA5SP515-201ENST00000364570 118 ntBASIC4.34□□□□□ -1.71
THBS1P07996 RNU6-969P-201ENST00000383900 105 ntBASIC4.34□□□□□ -1.71
THBS1P07996 RNU1-73P-201ENST00000383971 164 ntBASIC4.34□□□□□ -1.71
THBS1P07996 RNU6-147P-201ENST00000383983 107 ntBASIC4.34□□□□□ -1.71
THBS1P07996 MIR141-201ENST00000384975 95 ntBASIC4.34□□□□□ -1.71
THBS1P07996 RNA5SP390-201ENST00000410191 113 ntBASIC4.34□□□□□ -1.71
THBS1P07996 Z74021.1-201ENST00000423610 407 ntBASIC4.34□□□□□ -1.71
THBS1P07996 HSPE1P13-201ENST00000451143 297 ntBASIC4.34□□□□□ -1.71
THBS1P07996 AC009220.1-201ENST00000451614 275 ntBASIC4.34□□□□□ -1.71
THBS1P07996 snoU13.24-201ENST00000458998 104 ntBASIC4.34□□□□□ -1.71
THBS1P07996 SCARNA22-201ENST00000503991 125 ntBASIC4.34□□□□□ -1.71
THBS1P07996 AC091868.1-201ENST00000508746 304 ntBASIC4.34□□□□□ -1.71
THBS1P07996 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.34□□□□□ -1.71
THBS1P07996 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.34□□□□□ -1.71
THBS1P07996 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.34□□□□□ -1.71
THBS1P07996 AL391358.1-201ENST00000605342 190 ntBASIC4.34□□□□□ -1.71
THBS1P07996 FTX_3.1-201ENST00000610451 147 ntBASIC4.34□□□□□ -1.71
THBS1P07996 AC140113.4-201ENST00000622087 222 ntBASIC4.34□□□□□ -1.71
THBS1P07996 U2.21-201ENST00000637295 81 ntBASIC4.34□□□□□ -1.71
THBS1P07996 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
THBS1P07996 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
THBS1P07996 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.34□□□□□ -1.71
THBS1P07996 ADAM3A-203ENST00000461344 2157 ntBASIC4.34□□□□□ -1.72
THBS1P07996 AL133383.2-201ENST00000622958 2336 ntBASIC4.34□□□□□ -1.72
THBS1P07996 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.72
THBS1P07996 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
THBS1P07996 MAPK10-303ENST00000641324 3959 ntBASIC4.34□□□□□ -1.72
THBS1P07996 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
THBS1P07996 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
THBS1P07996 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.33□□□□□ -1.72
THBS1P07996 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
THBS1P07996 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.33□□□□□ -1.72
THBS1P07996 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
THBS1P07996 MAPK10-263ENST00000641052 4307 ntBASIC4.33□□□□□ -1.72
THBS1P07996 AC079741.1-201ENST00000321498 212 ntBASIC4.33□□□□□ -1.72
THBS1P07996 RNU6-778P-201ENST00000363269 103 ntBASIC4.33□□□□□ -1.72
THBS1P07996 RNU6-1205P-201ENST00000363625 106 ntBASIC4.33□□□□□ -1.72
THBS1P07996 RNU6-915P-201ENST00000364943 103 ntBASIC4.33□□□□□ -1.72
THBS1P07996 RNU1-82P-201ENST00000390851 165 ntBASIC4.33□□□□□ -1.72
THBS1P07996 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.33□□□□□ -1.72
THBS1P07996 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
THBS1P07996 H2AFZP5-201ENST00000446960 382 ntBASIC4.33□□□□□ -1.72
THBS1P07996 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.33□□□□□ -1.72
THBS1P07996 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.33□□□□□ -1.72
THBS1P07996 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.33□□□□□ -1.72
THBS1P07996 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.33□□□□□ -1.72
THBS1P07996 RNU6-168P-201ENST00000516189 101 ntBASIC4.33□□□□□ -1.72
THBS1P07996 RNU6-1282P-201ENST00000516735 96 ntBASIC4.33□□□□□ -1.72
THBS1P07996 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.33□□□□□ -1.72
THBS1P07996 CYP4A27P-201ENST00000567218 190 ntBASIC4.33□□□□□ -1.72
THBS1P07996 LINC00901.1-201ENST00000617252 152 ntBASIC4.33□□□□□ -1.72
THBS1P07996 AL445567.2-201ENST00000618935 498 ntBASIC4.33□□□□□ -1.72
THBS1P07996 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
THBS1P07996 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.33□□□□□ -1.72
THBS1P07996 MIR3914-2-201ENST00000637339 95 ntBASIC4.33□□□□□ -1.72
THBS1P07996 AC068647.2-201ENST00000637380 353 ntBASIC4.33□□□□□ -1.72
THBS1P07996 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
THBS1P07996 SDAD1P1-202ENST00000524156 2051 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms