Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU1-23P-201ENST00000363361 144 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 RNU6-236P-201ENST00000363886 106 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 RNU6-609P-201ENST00000365459 107 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 GPM6BP2-201ENST00000432046 144 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 RPL17P35-201ENST00000432217 549 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.86□□□□□ -2.27
COL1A1P02452 GPM6BP1-201ENST00000446387 144 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.86□□□□□ -2.27
COL1A1P02452 AC139453.3-201ENST00000493276 369 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC103851.1-201ENST00000506833 274 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.86□□□□□ -2.27
COL1A1P02452 AC067942.3-201ENST00000512025 362 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 RNU6-667P-201ENST00000517186 102 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC026616.1-201ENST00000523157 525 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.86□□□□□ -2.27
COL1A1P02452 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.86□□□□□ -2.27
COL1A1P02452 AC005668.1-201ENST00000571142 476 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 MIR3912-201ENST00000577566 105 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC098483.2-201ENST00000603158 454 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AL355598.1-201ENST00000604169 202 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AL355802.3-201ENST00000607571 545 ntBASIC0.86□□□□□ -2.27
COL1A1P02452 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.86□□□□□ -2.27
COL1A1P02452 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
COL1A1P02452 AL589826.1-201ENST00000340697 249 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 RNU6-1167P-201ENST00000363227 94 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 Y_RNA.280-201ENST00000364765 112 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 RNU6-1280P-201ENST00000365211 107 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 RNU6-16P-201ENST00000384385 107 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 RNU6-658P-201ENST00000384606 106 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 USP9YP26-201ENST00000421008 661 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.85□□□□□ -2.27
COL1A1P02452 CR769776.1-201ENST00000441254 787 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 RNU7-136P-201ENST00000458819 69 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 RPL37P6-201ENST00000460682 294 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 OR2A41P-201ENST00000473586 105 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.85□□□□□ -2.27
COL1A1P02452 AC112198.4-201ENST00000515450 351 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 RNU6-581P-201ENST00000516214 105 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 MIR5708-201ENST00000579723 85 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 AC005786.1-201ENST00000588553 154 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 AC091057.3-201ENST00000602684 733 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 NDUFA8P1-201ENST00000605525 367 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 AC009229.3-201ENST00000608056 282 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
COL1A1P02452 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
COL1A1P02452 AC138393.1-203ENST00000327086 343 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 RNU1-58P-201ENST00000362413 163 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 RNU6-942P-201ENST00000363002 107 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 RNA5SP499-201ENST00000363982 119 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 Y_RNA.412-201ENST00000384001 104 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 AL079342.2-201ENST00000403367 482 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.84□□□□□ -2.28
COL1A1P02452 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 GTF2IP3-201ENST00000433887 494 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 RPL18AP17-201ENST00000455326 198 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.84□□□□□ -2.28
COL1A1P02452 AK3P2-201ENST00000507976 429 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.84□□□□□ -2.28
COL1A1P02452 RNU5B-3P-201ENST00000516601 115 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.28
COL1A1P02452 SLC2A13P1-201ENST00000531560 322 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 OR6C7P-201ENST00000547875 934 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.84□□□□□ -2.28
COL1A1P02452 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.84□□□□□ -2.28
COL1A1P02452 AL121890.5-201ENST00000620848 304 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 AL136313.1-201ENST00000624804 202 ntBASIC0.84□□□□□ -2.28
COL1A1P02452 Y_RNA.60-201ENST00000362831 98 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 RNU6-271P-201ENST00000363858 105 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.83□□□□□ -2.28
COL1A1P02452 RSL24D1P8-201ENST00000434442 492 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.83□□□□□ -2.28
COL1A1P02452 MTCO3P45-201ENST00000443036 613 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 MTCYBP42-201ENST00000444653 1130 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 AC020550.1-201ENST00000447385 163 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.83□□□□□ -2.28
COL1A1P02452 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.83□□□□□ -2.28
COL1A1P02452 AC010631.1-201ENST00000474150 156 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 AP001025.1-201ENST00000486139 332 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 AC108729.1-201ENST00000487812 947 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.83□□□□□ -2.28
COL1A1P02452 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.83□□□□□ -2.28
COL1A1P02452 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.83□□□□□ -2.28
COL1A1P02452 AC093012.1-202ENST00000549403 582 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 SNRPGP1-201ENST00000553864 222 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.83□□□□□ -2.28
COL1A1P02452 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.83□□□□□ -2.28
COL1A1P02452 CYP4A27P-201ENST00000567218 190 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 RNU6-91P-201ENST00000607774 107 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 AC034229.4-201ENST00000607861 441 ntBASIC0.83□□□□□ -2.28
COL1A1P02452 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.82□□□□□ -2.28
COL1A1P02452 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
COL1A1P02452 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.82□□□□□ -2.28
COL1A1P02452 Y_RNA.390-201ENST00000383932 102 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 FTH1P15-201ENST00000406984 280 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 RPL37P10-201ENST00000412884 288 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.82□□□□□ -2.28
COL1A1P02452 MRPS36P1-201ENST00000421291 307 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms