Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AL136363.2-201ENST00000604173 851 ntBASIC2.9□□□□□ -1.95
MBD4O95243 AC103810.6-201ENST00000606708 136 ntBASIC2.9□□□□□ -1.95
MBD4O95243 Z82243.1-201ENST00000609432 473 ntBASIC2.9□□□□□ -1.95
MBD4O95243 AC046143.2-201ENST00000609789 160 ntBASIC2.9□□□□□ -1.95
MBD4O95243 HMGB1P24-202ENST00000615653 685 ntBASIC2.9□□□□□ -1.95
MBD4O95243 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.9□□□□□ -1.95
MBD4O95243 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
MBD4O95243 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
MBD4O95243 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
MBD4O95243 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.9□□□□□ -1.95
MBD4O95243 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.89□□□□□ -1.95
MBD4O95243 SNORA38-201ENST00000363946 132 ntBASIC2.89□□□□□ -1.95
MBD4O95243 RNU6-1303P-201ENST00000364841 107 ntBASIC2.89□□□□□ -1.95
MBD4O95243 RNU6-622P-201ENST00000384272 103 ntBASIC2.89□□□□□ -1.95
MBD4O95243 MTCO3P40-201ENST00000392516 676 ntBASIC2.89□□□□□ -1.95
MBD4O95243 RNA5SP390-201ENST00000410191 113 ntBASIC2.89□□□□□ -1.95
MBD4O95243 AC074117.2-201ENST00000417130 397 ntBASIC2.89□□□□□ -1.95
MBD4O95243 TIMM9P3-201ENST00000428659 274 ntBASIC2.89□□□□□ -1.95
MBD4O95243 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.89□□□□□ -1.95
MBD4O95243 AL606489.2-201ENST00000433886 234 ntBASIC2.89□□□□□ -1.95
MBD4O95243 AC016691.1-201ENST00000441321 413 ntBASIC2.89□□□□□ -1.95
MBD4O95243 AL354685.2-201ENST00000448218 1447 ntBASIC2.89□□□□□ -1.95
MBD4O95243 RNU7-180P-201ENST00000459240 63 ntBASIC2.89□□□□□ -1.95
MBD4O95243 RNU6-261P-201ENST00000459506 102 ntBASIC2.89□□□□□ -1.95
MBD4O95243 RPL9P6-201ENST00000492764 598 ntBASIC2.89□□□□□ -1.95
MBD4O95243 AC008526.1-201ENST00000509149 338 ntBASIC2.89□□□□□ -1.95
MBD4O95243 SNORA31.23-201ENST00000517219 133 ntBASIC2.89□□□□□ -1.95
MBD4O95243 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.89□□□□□ -1.95
MBD4O95243 AP001893.2-201ENST00000526949 202 ntBASIC2.89□□□□□ -1.95
MBD4O95243 AC105137.2-201ENST00000569073 466 ntBASIC2.89□□□□□ -1.95
MBD4O95243 AC073410.2-201ENST00000603240 332 ntBASIC2.89□□□□□ -1.95
MBD4O95243 U2.17-201ENST00000611454 95 ntBASIC2.89□□□□□ -1.95
MBD4O95243 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
MBD4O95243 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
MBD4O95243 AC124864.2-201ENST00000624736 186 ntBASIC2.89□□□□□ -1.95
MBD4O95243 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.89□□□□□ -1.95
MBD4O95243 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
MBD4O95243 AL606923.1-201ENST00000406616 190 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD4O95243 AC003685.2-201ENST00000422795 395 ntBASIC2.88□□□□□ -1.95
MBD4O95243 EIF4EP4-201ENST00000424916 578 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AP000705.1-201ENST00000454567 350 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD4O95243 RNU7-167P-201ENST00000459160 62 ntBASIC2.88□□□□□ -1.95
MBD4O95243 SRRM1P2-201ENST00000464531 1192 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC083798.1-201ENST00000472671 131 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD4O95243 MTCYBP40-201ENST00000509390 1135 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC026436.1-201ENST00000510537 270 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC008413.1-201ENST00000511864 177 ntBASIC2.88□□□□□ -1.95
MBD4O95243 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
MBD4O95243 MTND4P7-201ENST00000523876 130 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC104383.1-201ENST00000530297 370 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC021269.2-201ENST00000532318 330 ntBASIC2.88□□□□□ -1.95
MBD4O95243 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.88□□□□□ -1.95
MBD4O95243 PSMA3P-201ENST00000555485 635 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD4O95243 AC090897.2-201ENST00000581715 130 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC103987.3-201ENST00000582071 292 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.88□□□□□ -1.95
MBD4O95243 uc_338.34-201ENST00000617467 174 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AL359880.1-201ENST00000621879 266 ntBASIC2.88□□□□□ -1.95
MBD4O95243 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
MBD4O95243 MIR1291-201ENST00000627649 87 ntBASIC2.88□□□□□ -1.95
MBD4O95243 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.88□□□□□ -1.95
MBD4O95243 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
MBD4O95243 SNORD114-30-201ENST00000364448 72 ntBASIC2.87□□□□□ -1.95
MBD4O95243 RNU1-57P-201ENST00000384491 166 ntBASIC2.87□□□□□ -1.95
MBD4O95243 AL445529.1-201ENST00000398713 389 ntBASIC2.87□□□□□ -1.95
MBD4O95243 RNU2-63P-201ENST00000410792 194 ntBASIC2.87□□□□□ -1.95
MBD4O95243 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.87□□□□□ -1.95
MBD4O95243 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD4O95243 PSPHP1-201ENST00000450062 261 ntBASIC2.87□□□□□ -1.95
MBD4O95243 FDX1P2-201ENST00000450769 375 ntBASIC2.87□□□□□ -1.95
MBD4O95243 AP001025.1-201ENST00000486139 332 ntBASIC2.87□□□□□ -1.95
MBD4O95243 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.87□□□□□ -1.95
MBD4O95243 RPL23AP49-201ENST00000492925 468 ntBASIC2.87□□□□□ -1.95
MBD4O95243 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.87□□□□□ -1.95
MBD4O95243 SNORA31.15-201ENST00000516771 132 ntBASIC2.87□□□□□ -1.95
MBD4O95243 AC069113.1-201ENST00000517763 267 ntBASIC2.87□□□□□ -1.95
MBD4O95243 AC109479.2-201ENST00000517842 174 ntBASIC2.87□□□□□ -1.95
MBD4O95243 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD4O95243 AC023050.3-201ENST00000541142 333 ntBASIC2.87□□□□□ -1.95
MBD4O95243 AL133241.1-201ENST00000556832 487 ntBASIC2.87□□□□□ -1.95
MBD4O95243 MIR4446-201ENST00000578505 67 ntBASIC2.87□□□□□ -1.95
MBD4O95243 MIR4435-1-201ENST00000582552 80 ntBASIC2.87□□□□□ -1.95
MBD4O95243 MIR5739-201ENST00000619803 80 ntBASIC2.87□□□□□ -1.95
MBD4O95243 AP003400.5-201ENST00000624827 617 ntBASIC2.87□□□□□ -1.95
MBD4O95243 U4.7-201ENST00000638126 106 ntBASIC2.87□□□□□ -1.95
MBD4O95243 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
MBD4O95243 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
MBD4O95243 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
MBD4O95243 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
MBD4O95243 AC016717.2-201ENST00000609089 5141 ntBASIC2.86□□□□□ -1.95
MBD4O95243 RNU6-1085P-201ENST00000363576 107 ntBASIC2.86□□□□□ -1.95
MBD4O95243 MTCO3P41-201ENST00000414801 328 ntBASIC2.86□□□□□ -1.95
MBD4O95243 CYCSP48-201ENST00000417124 323 ntBASIC2.86□□□□□ -1.95
MBD4O95243 RPL7P54-201ENST00000438336 674 ntBASIC2.86□□□□□ -1.95
MBD4O95243 MTND1P1-201ENST00000445453 368 ntBASIC2.86□□□□□ -1.95
MBD4O95243 CYP2C59P-201ENST00000457790 269 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms