Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 U6atac.2-201ENST00000408644 118 ntBASIC2.87□□□□□ -1.95
RTN3O95197 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.87□□□□□ -1.95
RTN3O95197 RPL30P4-201ENST00000429309 333 ntBASIC2.87□□□□□ -1.95
RTN3O95197 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.87□□□□□ -1.95
RTN3O95197 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.87□□□□□ -1.95
RTN3O95197 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.87□□□□□ -1.95
RTN3O95197 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.87□□□□□ -1.95
RTN3O95197 AC080013.2-201ENST00000460866 323 ntBASIC2.87□□□□□ -1.95
RTN3O95197 AC073901.1-201ENST00000462471 408 ntBASIC2.87□□□□□ -1.95
RTN3O95197 AC112771.1-201ENST00000463581 102 ntBASIC2.87□□□□□ -1.95
RTN3O95197 DYNLL1P5-201ENST00000467158 270 ntBASIC2.87□□□□□ -1.95
RTN3O95197 AC103975.1-201ENST00000482506 483 ntBASIC2.87□□□□□ -1.95
RTN3O95197 SNORA9.3-201ENST00000516383 129 ntBASIC2.87□□□□□ -1.95
RTN3O95197 Y_RNA.704-201ENST00000516851 102 ntBASIC2.87□□□□□ -1.95
RTN3O95197 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RTN3O95197 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.87□□□□□ -1.95
RTN3O95197 AC023050.3-201ENST00000541142 333 ntBASIC2.87□□□□□ -1.95
RTN3O95197 AL157687.1-201ENST00000554853 619 ntBASIC2.87□□□□□ -1.95
RTN3O95197 MIR3162-201ENST00000581818 82 ntBASIC2.87□□□□□ -1.95
RTN3O95197 AC105245.1-201ENST00000581934 244 ntBASIC2.87□□□□□ -1.95
RTN3O95197 AC069294.1-201ENST00000608397 350 ntBASIC2.87□□□□□ -1.95
RTN3O95197 MIR6715A-201ENST00000615929 79 ntBASIC2.87□□□□□ -1.95
RTN3O95197 AL449363.1-201ENST00000617815 186 ntBASIC2.87□□□□□ -1.95
RTN3O95197 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.86□□□□□ -1.95
RTN3O95197 MIR449A-201ENST00000362113 91 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-37P-201ENST00000362692 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-11P-201ENST00000364234 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-25P-201ENST00000383873 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-1-201ENST00000383898 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-483P-201ENST00000384088 108 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-48P-201ENST00000384161 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-36P-201ENST00000384172 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-4P-201ENST00000384205 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-5P-201ENST00000384238 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-3P-201ENST00000384314 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-16P-201ENST00000384385 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-1215P-201ENST00000384441 102 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-15P-201ENST00000384534 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-2-201ENST00000384627 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-29P-201ENST00000384637 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-9-201ENST00000384776 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-33P-201ENST00000384793 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-220P-201ENST00000390919 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.86□□□□□ -1.95
RTN3O95197 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.86□□□□□ -1.95
RTN3O95197 SUMO1P4-201ENST00000429430 302 ntBASIC2.86□□□□□ -1.95
RTN3O95197 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.86□□□□□ -1.95
RTN3O95197 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.86□□□□□ -1.95
RTN3O95197 CR769767.1-201ENST00000436337 346 ntBASIC2.86□□□□□ -1.95
RTN3O95197 AL121601.2-201ENST00000438019 707 ntBASIC2.86□□□□□ -1.95
RTN3O95197 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.86□□□□□ -1.95
RTN3O95197 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.86□□□□□ -1.95
RTN3O95197 EEF1B2P7-201ENST00000451177 676 ntBASIC2.86□□□□□ -1.95
RTN3O95197 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.86□□□□□ -1.95
RTN3O95197 MTCO3P38-201ENST00000468910 766 ntBASIC2.86□□□□□ -1.95
RTN3O95197 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.86□□□□□ -1.95
RTN3O95197 AC091885.1-201ENST00000506658 268 ntBASIC2.86□□□□□ -1.95
RTN3O95197 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RTN3O95197 MTCYBP40-201ENST00000509390 1135 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RPPH1-2P-201ENST00000516688 293 ntBASIC2.86□□□□□ -1.95
RTN3O95197 AK6P1-201ENST00000540219 478 ntBASIC2.86□□□□□ -1.95
RTN3O95197 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.86□□□□□ -1.95
RTN3O95197 AC090115.3-201ENST00000553218 849 ntBASIC2.86□□□□□ -1.95
RTN3O95197 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.86□□□□□ -1.95
RTN3O95197 AL138976.2-201ENST00000563989 694 ntBASIC2.86□□□□□ -1.95
RTN3O95197 AL121917.1-203ENST00000605534 577 ntBASIC2.86□□□□□ -1.95
RTN3O95197 RNU6-6P-201ENST00000606623 107 ntBASIC2.86□□□□□ -1.95
RTN3O95197 YWHAEP7-203ENST00000622054 312 ntBASIC2.86□□□□□ -1.95
RTN3O95197 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
RTN3O95197 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RTN3O95197 ZNF271P-202ENST00000465539 1970 ntBASIC2.85□□□□□ -1.95
RTN3O95197 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.85□□□□□ -1.95
RTN3O95197 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RTN3O95197 SNORD114-19-201ENST00000363072 75 ntBASIC2.85□□□□□ -1.95
RTN3O95197 RNA5SP393-201ENST00000363423 117 ntBASIC2.85□□□□□ -1.95
RTN3O95197 RNU6-82P-201ENST00000363970 107 ntBASIC2.85□□□□□ -1.95
RTN3O95197 RNU4-66P-201ENST00000365199 138 ntBASIC2.85□□□□□ -1.95
RTN3O95197 RNU6-622P-201ENST00000384272 103 ntBASIC2.85□□□□□ -1.95
RTN3O95197 Y_RNA.516-201ENST00000384541 124 ntBASIC2.85□□□□□ -1.95
RTN3O95197 MIR181A2-201ENST00000384863 110 ntBASIC2.85□□□□□ -1.95
RTN3O95197 AC074117.2-201ENST00000417130 397 ntBASIC2.85□□□□□ -1.95
RTN3O95197 AC138623.1-201ENST00000418060 216 ntBASIC2.85□□□□□ -1.95
RTN3O95197 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.85□□□□□ -1.95
RTN3O95197 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.85□□□□□ -1.95
RTN3O95197 AC104389.3-201ENST00000445629 235 ntBASIC2.85□□□□□ -1.95
RTN3O95197 AL109933.2-201ENST00000452651 260 ntBASIC2.85□□□□□ -1.95
RTN3O95197 SNORD60.2-201ENST00000516883 86 ntBASIC2.85□□□□□ -1.95
RTN3O95197 SNORA31.23-201ENST00000517219 133 ntBASIC2.85□□□□□ -1.95
RTN3O95197 CYCSP27-201ENST00000527643 293 ntBASIC2.85□□□□□ -1.95
RTN3O95197 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.85□□□□□ -1.95
RTN3O95197 AC010186.2-204ENST00000537668 439 ntBASIC2.85□□□□□ -1.95
RTN3O95197 OR11H5P-201ENST00000554039 926 ntBASIC2.85□□□□□ -1.95
RTN3O95197 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.85□□□□□ -1.95
RTN3O95197 AC136619.2-201ENST00000563361 631 ntBASIC2.85□□□□□ -1.95
RTN3O95197 MIR4446-201ENST00000578505 67 ntBASIC2.85□□□□□ -1.95
RTN3O95197 AC013412.1-201ENST00000610687 192 ntBASIC2.85□□□□□ -1.95
RTN3O95197 AC104237.2-201ENST00000612456 443 ntBASIC2.85□□□□□ -1.95
RTN3O95197 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RTN3O95197 AC024581.2-201ENST00000619986 252 ntBASIC2.85□□□□□ -1.95
RTN3O95197 MIR1321-201ENST00000637766 79 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms