Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCAF4O95104 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SCAF4O95104 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.32□□□□□ -1.88
SCAF4O95104 AC006504.1-201ENST00000562493 3666 ntBASIC3.32□□□□□ -1.88
SCAF4O95104 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCAF4O95104 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SCAF4O95104 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.31□□□□□ -1.88
SCAF4O95104 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SCAF4O95104 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCAF4O95104 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SCAF4O95104 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SCAF4O95104 RNU6-212P-201ENST00000362642 104 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 snoU2_19.2-201ENST00000363024 80 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 RNU6-778P-201ENST00000363269 103 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 SNORD115-46-201ENST00000390982 71 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 U3.37-201ENST00000408528 213 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 ELOCP19-201ENST00000411919 318 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.31□□□□□ -1.88
SCAF4O95104 AL358453.1-201ENST00000422522 250 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 RPL18P10-201ENST00000425606 538 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 SDAD1P3-201ENST00000427380 333 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 RPL21P40-201ENST00000428586 483 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 NDUFB4P6-201ENST00000436819 366 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 AC083863.1-201ENST00000438811 231 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 CYCSP32-201ENST00000440548 321 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 AC098831.1-201ENST00000440661 216 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.31□□□□□ -1.88
SCAF4O95104 HMGB3P8-201ENST00000449709 577 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 RN7SL810P-201ENST00000493031 276 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 RNU6-111P-201ENST00000517179 105 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 MRPS36P4-201ENST00000534436 298 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.31□□□□□ -1.88
SCAF4O95104 MIR4782-201ENST00000577987 79 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 AC010928.2-201ENST00000588017 287 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 RPL23AP78-201ENST00000599928 470 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 AC024153.1-201ENST00000603103 365 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 AL606490.9-201ENST00000603331 271 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 AL355877.2-201ENST00000603670 358 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 AL591424.2-201ENST00000617023 128 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SCAF4O95104 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
SCAF4O95104 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.31□□□□□ -1.88
SCAF4O95104 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SCAF4O95104 PWAR6-201ENST00000552334 4618 ntBASIC3.31□□□□□ -1.88
SCAF4O95104 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.31□□□□□ -1.88
SCAF4O95104 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.3□□□□□ -1.88
SCAF4O95104 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 RNA5SP509-201ENST00000364577 119 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 U3.13-201ENST00000364804 214 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
SCAF4O95104 Y_RNA.478-201ENST00000384358 107 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 RNY3P4-201ENST00000384428 101 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 PPIAP31-201ENST00000405422 495 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 AL603908.1-201ENST00000406098 201 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 RNU6-1077P-201ENST00000410506 102 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.3□□□□□ -1.88
SCAF4O95104 AL512844.2-201ENST00000433990 593 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 BX679664.1-201ENST00000434429 253 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 SUMO1P3-201ENST00000439961 304 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 AL513124.1-201ENST00000450410 614 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.3□□□□□ -1.88
SCAF4O95104 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.3□□□□□ -1.88
SCAF4O95104 RN7SL98P-201ENST00000462271 300 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.3□□□□□ -1.88
SCAF4O95104 RPL30P5-201ENST00000494923 336 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 HMGB3P17-201ENST00000504195 649 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 RNU1-103P-201ENST00000516502 125 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 RNU6-1231P-201ENST00000517185 103 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.3□□□□□ -1.88
SCAF4O95104 AC073410.2-201ENST00000603240 332 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 AC010900.2-201ENST00000604508 210 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 ARF4P1-201ENST00000605447 541 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.3□□□□□ -1.88
SCAF4O95104 MIR6076-201ENST00000617521 113 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 AC097372.5-201ENST00000623665 376 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 AC011944.2-201ENST00000624440 683 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.3□□□□□ -1.88
SCAF4O95104 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.3□□□□□ -1.88
SCAF4O95104 AC241585.2-209ENST00000638217 143 ntBASIC3.3□□□□□ -1.88
SCAF4O95104 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SCAF4O95104 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCAF4O95104 AC007496.3-201ENST00000624987 3443 ntBASIC3.29□□□□□ -1.88
SCAF4O95104 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.29□□□□□ -1.88
SCAF4O95104 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCAF4O95104 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.29□□□□□ -1.88
SCAF4O95104 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCAF4O95104 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCAF4O95104 AC126755.2-208ENST00000327792 462 ntBASIC3.29□□□□□ -1.88
SCAF4O95104 AC138969.1-213ENST00000331436 462 ntBASIC3.29□□□□□ -1.88
SCAF4O95104 Y_RNA.20-201ENST00000362479 113 ntBASIC3.29□□□□□ -1.88
SCAF4O95104 RN7SKP280-201ENST00000364196 304 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms