Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
SEMA3DO95025 AL157786.1-207ENST00000627771 695 ntBASIC1.64□□□□□ -2.15
SEMA3DO95025 SNORA25B-201ENST00000365507 128 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
SEMA3DO95025 RNU6-843P-201ENST00000384454 104 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 MIR504-201ENST00000385065 83 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 MIR95-201ENST00000385072 81 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 RPL23AP32-201ENST00000395315 459 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 RPS3AP36-201ENST00000398190 775 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 MED13P1-201ENST00000428342 171 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.63□□□□□ -2.15
SEMA3DO95025 snoU13.15-201ENST00000459407 104 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AC018868.1-201ENST00000491307 315 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 HMGB1P30-201ENST00000492455 606 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AC117522.1-201ENST00000509821 380 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 RN7SKP287-201ENST00000516546 266 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 RNU2-46P-201ENST00000517038 113 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AC107953.1-201ENST00000522216 297 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.63□□□□□ -2.15
SEMA3DO95025 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.63□□□□□ -2.15
SEMA3DO95025 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.63□□□□□ -2.15
SEMA3DO95025 AC008015.1-201ENST00000555505 465 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AC005771.1-201ENST00000585581 349 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AC008521.1-201ENST00000587471 187 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AC012065.4-201ENST00000602445 679 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AC021646.1-201ENST00000605469 484 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AL121992.2-201ENST00000606262 256 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.63□□□□□ -2.15
SEMA3DO95025 AC096772.1-201ENST00000609146 564 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 U6.42-201ENST00000618440 107 ntBASIC1.63□□□□□ -2.15
SEMA3DO95025 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SEMA3DO95025 RNU6-529P-201ENST00000363383 104 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 U3.13-201ENST00000364804 214 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 RNU6-384P-201ENST00000364900 104 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 RNU6-61P-201ENST00000365528 109 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 RNU1-57P-201ENST00000384491 166 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 SNORA40.18-201ENST00000391200 128 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 RNA5SP450-201ENST00000411206 102 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 RNA5SP111-201ENST00000411386 101 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SEMA3DO95025 AC012308.1-201ENST00000451232 178 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 AC104564.1-201ENST00000493028 407 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.62□□□□□ -2.15
SEMA3DO95025 FABP5P5-201ENST00000515537 406 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 RNU6-970P-201ENST00000516312 107 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 SCARNA24.1-201ENST00000516465 137 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 Y_RNA.687-201ENST00000516558 91 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.62□□□□□ -2.15
SEMA3DO95025 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.62□□□□□ -2.15
SEMA3DO95025 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.62□□□□□ -2.15
SEMA3DO95025 AC093249.1-201ENST00000567049 203 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 AC073410.2-201ENST00000603240 332 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 AL138889.2-201ENST00000603883 242 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 SEPT7P9-203ENST00000604116 343 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 AC093424.1-201ENST00000604999 338 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 AL670379.4-201ENST00000605279 254 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.62□□□□□ -2.15
SEMA3DO95025 MIR6845-201ENST00000613182 61 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 MIR3529-201ENST00000637713 78 ntBASIC1.62□□□□□ -2.15
SEMA3DO95025 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.61□□□□□ -2.15
SEMA3DO95025 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.61□□□□□ -2.15
SEMA3DO95025 SNORA20.2-201ENST00000383922 131 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 SNORD116-20-201ENST00000384529 92 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 MIR186-201ENST00000384988 86 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 MIR561-201ENST00000385216 97 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SEMA3DO95025 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SEMA3DO95025 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 Y_RNA.598-201ENST00000410480 95 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.61□□□□□ -2.15
SEMA3DO95025 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.61□□□□□ -2.15
SEMA3DO95025 MTND2P9-201ENST00000422293 931 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 MTATP6P16-201ENST00000434543 526 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 MTND6P13-201ENST00000443510 523 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 AL360271.2-201ENST00000447710 161 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 NDUFB1P2-201ENST00000449477 176 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 RPL30P6-201ENST00000475925 342 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 AP001025.1-201ENST00000486139 332 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.61□□□□□ -2.15
SEMA3DO95025 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 RNU1-86P-201ENST00000516108 154 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 RNU2-53P-201ENST00000516257 147 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 RNU1-107P-201ENST00000516617 154 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 SNORA48.11-201ENST00000517015 89 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 RNU6-232P-201ENST00000517144 64 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.61□□□□□ -2.15
SEMA3DO95025 AP004607.1-201ENST00000524456 203 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SEMA3DO95025 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.61□□□□□ -2.15
SEMA3DO95025 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.61□□□□□ -2.15
SEMA3DO95025 AK6P1-201ENST00000540219 478 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 AL158827.2-201ENST00000602494 330 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 AL133173.2-201ENST00000614270 90 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 AC009159.2-201ENST00000617603 606 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 AL359740.1-201ENST00000624340 592 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 AC019226.2-201ENST00000625973 424 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms