Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF40O75150 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF40O75150 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF40O75150 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF40O75150 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF40O75150 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF40O75150 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF40O75150 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RNF40O75150 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF40O75150 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF40O75150 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF40O75150 RNU1-83P-201ENST00000363426 164 ntBASIC5.17□□□□□ -1.58
RNF40O75150 Y_RNA.310-201ENST00000365063 113 ntBASIC5.17□□□□□ -1.58
RNF40O75150 AL357515.1-201ENST00000402967 542 ntBASIC5.17□□□□□ -1.58
RNF40O75150 RNU6-710P-201ENST00000410424 105 ntBASIC5.17□□□□□ -1.58
RNF40O75150 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF40O75150 AC091390.1-201ENST00000433904 331 ntBASIC5.17□□□□□ -1.58
RNF40O75150 AL031737.1-201ENST00000450125 223 ntBASIC5.17□□□□□ -1.58
RNF40O75150 RNU7-141P-201ENST00000459304 62 ntBASIC5.17□□□□□ -1.58
RNF40O75150 RN7SL354P-201ENST00000469282 294 ntBASIC5.17□□□□□ -1.58
RNF40O75150 RPS4XP13-201ENST00000483219 789 ntBASIC5.17□□□□□ -1.58
RNF40O75150 AC091042.1-201ENST00000579213 173 ntBASIC5.17□□□□□ -1.58
RNF40O75150 AC209154.1-201ENST00000582156 337 ntBASIC5.17□□□□□ -1.58
RNF40O75150 MIR6134-201ENST00000617606 109 ntBASIC5.17□□□□□ -1.58
RNF40O75150 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF40O75150 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RNF40O75150 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RNF40O75150 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF40O75150 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RNF40O75150 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNF40O75150 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RNF40O75150 AL139811.1-201ENST00000424779 2299 ntBASIC5.16□□□□□ -1.58
RNF40O75150 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF40O75150 RNU6-778P-201ENST00000363269 103 ntBASIC5.16□□□□□ -1.58
RNF40O75150 RN7SKP113-201ENST00000363891 295 ntBASIC5.16□□□□□ -1.58
RNF40O75150 SNORD58C-201ENST00000365223 64 ntBASIC5.16□□□□□ -1.58
RNF40O75150 RNA5SP235-201ENST00000365411 114 ntBASIC5.16□□□□□ -1.58
RNF40O75150 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF40O75150 Y_RNA.388-201ENST00000383919 113 ntBASIC5.16□□□□□ -1.58
RNF40O75150 MIR195-201ENST00000385194 87 ntBASIC5.16□□□□□ -1.58
RNF40O75150 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF40O75150 CYCSP49-201ENST00000420810 319 ntBASIC5.16□□□□□ -1.58
RNF40O75150 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF40O75150 RPL39P29-201ENST00000447779 157 ntBASIC5.16□□□□□ -1.58
RNF40O75150 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF40O75150 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF40O75150 RN7SL817P-201ENST00000480777 288 ntBASIC5.16□□□□□ -1.58
RNF40O75150 RN7SL441P-201ENST00000492388 296 ntBASIC5.16□□□□□ -1.58
RNF40O75150 CKS1BP7-201ENST00000522230 235 ntBASIC5.16□□□□□ -1.58
RNF40O75150 uc_338.28-201ENST00000612082 187 ntBASIC5.16□□□□□ -1.58
RNF40O75150 MIR6780A-201ENST00000615089 68 ntBASIC5.16□□□□□ -1.58
RNF40O75150 AC140113.4-201ENST00000622087 222 ntBASIC5.16□□□□□ -1.58
RNF40O75150 MIR3529-201ENST00000637713 78 ntBASIC5.16□□□□□ -1.58
RNF40O75150 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RNF40O75150 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
RNF40O75150 MFSD8-216ENST00000641147 4009 ntBASIC5.16□□□□□ -1.58
RNF40O75150 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF40O75150 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF40O75150 AL133383.2-201ENST00000622958 2336 ntBASIC5.15□□□□□ -1.58
RNF40O75150 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.15□□□□□ -1.58
RNF40O75150 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF40O75150 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF40O75150 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF40O75150 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.15□□□□□ -1.58
RNF40O75150 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RNF40O75150 AC079741.1-201ENST00000321498 212 ntBASIC5.15□□□□□ -1.59
RNF40O75150 RNU6-1205P-201ENST00000363625 106 ntBASIC5.15□□□□□ -1.59
RNF40O75150 U8.6-201ENST00000364939 135 ntBASIC5.15□□□□□ -1.59
RNF40O75150 Y_RNA.415-201ENST00000384012 112 ntBASIC5.15□□□□□ -1.59
RNF40O75150 Y_RNA.456-201ENST00000384232 111 ntBASIC5.15□□□□□ -1.59
RNF40O75150 RNU6-905P-201ENST00000384434 107 ntBASIC5.15□□□□□ -1.59
RNF40O75150 RPL21P17-201ENST00000397467 475 ntBASIC5.15□□□□□ -1.59
RNF40O75150 AL512604.1-201ENST00000404812 257 ntBASIC5.15□□□□□ -1.59
RNF40O75150 RNY4P29-201ENST00000410801 97 ntBASIC5.15□□□□□ -1.59
RNF40O75150 AC009237.10-201ENST00000414112 510 ntBASIC5.15□□□□□ -1.59
RNF40O75150 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF40O75150 AL354714.3-201ENST00000447284 493 ntBASIC5.15□□□□□ -1.59
RNF40O75150 RN7SL443P-201ENST00000464331 290 ntBASIC5.15□□□□□ -1.59
RNF40O75150 RPL7AP28-201ENST00000464513 571 ntBASIC5.15□□□□□ -1.59
RNF40O75150 AC006517.1-201ENST00000480485 328 ntBASIC5.15□□□□□ -1.59
RNF40O75150 SNORA31.16-201ENST00000516773 139 ntBASIC5.15□□□□□ -1.59
RNF40O75150 RNU6-537P-201ENST00000517277 103 ntBASIC5.15□□□□□ -1.59
RNF40O75150 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF40O75150 AP005432.2-201ENST00000608162 586 ntBASIC5.15□□□□□ -1.59
RNF40O75150 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF40O75150 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF40O75150 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF40O75150 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF40O75150 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF40O75150 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF40O75150 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF40O75150 ADAM3A-203ENST00000461344 2157 ntBASIC5.15□□□□□ -1.59
RNF40O75150 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF40O75150 OR51H2P-202ENST00000641424 3046 ntBASIC5.15□□□□□ -1.59
RNF40O75150 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RNF40O75150 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF40O75150 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RNF40O75150 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RNF40O75150 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF40O75150 AL136164.4-201ENST00000625013 2135 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms