Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL163051.2-201ENST00000618976 735 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 AC013470.4-201ENST00000619978 986 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 AC084824.4-201ENST00000620106 731 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 AC093648.1-201ENST00000623546 606 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 AC106730.3-201ENST00000624568 641 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 AC019226.1-201ENST00000625666 515 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SSSCA1O60232 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.22□□□□□ -2.37
SSSCA1O60232 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
SSSCA1O60232 RNU6-910P-201ENST00000390844 107 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 MTCO2P31-201ENST00000402702 684 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 AL139397.2-201ENST00000404529 772 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.22□□□□□ -2.37
SSSCA1O60232 ISCA1P1-201ENST00000426679 387 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.22□□□□□ -2.37
SSSCA1O60232 AC002429.1-201ENST00000437672 148 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 MTCYBP11-201ENST00000447254 1109 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.22□□□□□ -2.37
SSSCA1O60232 SNRPFP3-201ENST00000457792 225 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 AC108729.3-201ENST00000513484 108 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 RNU6-165P-201ENST00000517170 99 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 RN7SKP256-201ENST00000517201 314 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.22□□□□□ -2.37
SSSCA1O60232 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.22□□□□□ -2.37
SSSCA1O60232 AL121579.1-201ENST00000555129 305 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 FAM106DP-201ENST00000586416 501 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 AC068790.6-201ENST00000602558 258 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 MIR6516-201ENST00000630554 81 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 OR4G1P-203ENST00000641984 1631 ntBASIC0.22□□□□□ -2.37
SSSCA1O60232 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.22□□□□□ -2.37
SSSCA1O60232 ELL2P3-201ENST00000457883 1602 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 RNU6-1010P-201ENST00000362757 107 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 RNU6-942P-201ENST00000363002 107 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 RNU6-839P-201ENST00000363347 108 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 RNU6-512P-201ENST00000364438 103 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 MIR200A-201ENST00000384875 90 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.21□□□□□ -2.38
SSSCA1O60232 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.21□□□□□ -2.38
SSSCA1O60232 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SSSCA1O60232 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.21□□□□□ -2.38
SSSCA1O60232 RN7SKP49-201ENST00000516675 260 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.21□□□□□ -2.38
SSSCA1O60232 AC018659.1-201ENST00000551083 169 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SSSCA1O60232 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.21□□□□□ -2.38
SSSCA1O60232 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.21□□□□□ -2.38
SSSCA1O60232 MIR4498-201ENST00000577599 66 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 MIR4782-201ENST00000577987 79 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 AP001596.2-201ENST00000608410 312 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 TUG1_2.1-201ENST00000614234 87 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 AC009032.1-201ENST00000617574 431 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 AL158163.2-201ENST00000619110 700 ntBASIC0.21□□□□□ -2.38
SSSCA1O60232 AL391994.1-201ENST00000254724 282 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 MIR194-1-201ENST00000384892 85 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 RNU6-1300P-201ENST00000391046 108 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 MIR942-201ENST00000401111 86 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 RNU6-321P-201ENST00000410912 106 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 GTF2IP3-201ENST00000433887 494 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 AC020550.1-201ENST00000447385 163 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.2□□□□□ -2.38
SSSCA1O60232 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.2□□□□□ -2.38
SSSCA1O60232 AC118282.2-201ENST00000508739 374 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.2□□□□□ -2.38
SSSCA1O60232 RNU6-760P-201ENST00000516078 97 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 RNA5SP134-201ENST00000516492 96 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.2□□□□□ -2.38
SSSCA1O60232 AL590705.4-201ENST00000532209 134 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 MTATP6P3-201ENST00000581686 676 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.2□□□□□ -2.38
SSSCA1O60232 AL512605.2-201ENST00000592972 256 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 AL353765.1-201ENST00000605514 183 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 AC068787.1-201ENST00000623908 691 ntBASIC0.2□□□□□ -2.38
SSSCA1O60232 MTND4P14-201ENST00000435799 1354 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 OR4G2P-201ENST00000328113 903 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 RNU6-28P-201ENST00000362378 107 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 RNU4-79P-201ENST00000362764 141 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 RNU6-655P-201ENST00000362858 107 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 RNU6-288P-201ENST00000363690 104 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 MTATP6P30-201ENST00000443540 664 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.19□□□□□ -2.38
SSSCA1O60232 RPL37P6-201ENST00000460682 294 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.19□□□□□ -2.38
SSSCA1O60232 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.19□□□□□ -2.38
SSSCA1O60232 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.19□□□□□ -2.38
SSSCA1O60232 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.19□□□□□ -2.38
SSSCA1O60232 RNU6-390P-201ENST00000516259 103 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 AC022861.1-201ENST00000522981 663 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 AP001893.2-201ENST00000526949 202 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 AC093012.1-202ENST00000549403 582 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 AC044913.1-201ENST00000557200 430 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.19□□□□□ -2.38
SSSCA1O60232 AL390208.1-201ENST00000605885 644 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 AL442644.1-201ENST00000454390 3105 ntBASIC0.19□□□□□ -2.38
SSSCA1O60232 LINC02555-201ENST00000563933 1951 ntBASIC0.18□□□□□ -2.38
SSSCA1O60232 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
SSSCA1O60232 RNU6-529P-201ENST00000363383 104 ntBASIC0.18□□□□□ -2.38
SSSCA1O60232 RNU6-188P-201ENST00000364207 107 ntBASIC0.18□□□□□ -2.38
SSSCA1O60232 Y_RNA.234-201ENST00000364409 97 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms