Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.09□□□□□ -1.75
SRGAP3O43295 RPL7P5-201ENST00000471472 736 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 NDUFB9P3-201ENST00000521269 501 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.09□□□□□ -1.75
SRGAP3O43295 AP003733.2-201ENST00000529409 171 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 AC068446.3-201ENST00000555285 382 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.09□□□□□ -1.75
SRGAP3O43295 MIR7112-201ENST00000616126 65 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.09□□□□□ -1.75
SRGAP3O43295 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 SDR42E1P4-201ENST00000620894 481 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.09□□□□□ -1.75
SRGAP3O43295 ZNF299P-201ENST00000406845 1804 ntBASIC4.09□□□□□ -1.76
SRGAP3O43295 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SRGAP3O43295 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SRGAP3O43295 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SRGAP3O43295 AP002088.1-201ENST00000382740 395 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 SNORA69.1-201ENST00000390904 137 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 AL357075.1-201ENST00000404107 726 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.08□□□□□ -1.76
SRGAP3O43295 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SRGAP3O43295 FCF1P4-201ENST00000448326 183 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 NDUFS5P3-201ENST00000450668 321 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 AC087588.1-201ENST00000462203 316 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.08□□□□□ -1.76
SRGAP3O43295 TRBVB-201ENST00000477100 408 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.08□□□□□ -1.76
SRGAP3O43295 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.08□□□□□ -1.76
SRGAP3O43295 ASNSP1-201ENST00000518311 1939 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.08□□□□□ -1.76
SRGAP3O43295 HIGD1AP1-201ENST00000550979 275 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 HMGB1P14-201ENST00000557424 591 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.08□□□□□ -1.76
SRGAP3O43295 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.08□□□□□ -1.76
SRGAP3O43295 AC073657.2-201ENST00000605661 303 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.08□□□□□ -1.76
SRGAP3O43295 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SRGAP3O43295 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.08□□□□□ -1.76
SRGAP3O43295 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SRGAP3O43295 AC058791.1-201ENST00000608412 3198 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SRGAP3O43295 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SRGAP3O43295 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SRGAP3O43295 RNU6-173P-201ENST00000364215 104 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 RNU6-827P-201ENST00000365553 106 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 Y_RNA.562-201ENST00000384695 113 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 RNU6-1093P-201ENST00000391194 107 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 RNA5SP229-201ENST00000410809 99 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.07□□□□□ -1.76
SRGAP3O43295 BX510359.1-201ENST00000456973 237 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 snoU13.22-201ENST00000459428 104 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 U8.21-201ENST00000459536 136 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 RPL32P34-201ENST00000486380 400 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 MLLT10P2-201ENST00000506434 249 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.07□□□□□ -1.76
SRGAP3O43295 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.07□□□□□ -1.76
SRGAP3O43295 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.07□□□□□ -1.76
SRGAP3O43295 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.07□□□□□ -1.76
SRGAP3O43295 FAM60BP-201ENST00000578364 658 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 AL161798.1-201ENST00000604630 131 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 AC096577.2-201ENST00000611455 153 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 AC004852.3-201ENST00000614131 326 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 AC006065.5-201ENST00000623427 349 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SRGAP3O43295 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SRGAP3O43295 PWAR6-201ENST00000552334 4618 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 MTND5P9-201ENST00000503854 1755 ntBASIC4.07□□□□□ -1.76
SRGAP3O43295 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
SRGAP3O43295 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
SRGAP3O43295 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SRGAP3O43295 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SRGAP3O43295 Y_RNA.117-201ENST00000363294 101 ntBASIC4.06□□□□□ -1.76
SRGAP3O43295 MIR514A1-201ENST00000385133 98 ntBASIC4.06□□□□□ -1.76
SRGAP3O43295 AL096701.2-201ENST00000416920 238 ntBASIC4.06□□□□□ -1.76
SRGAP3O43295 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.06□□□□□ -1.76
SRGAP3O43295 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SRGAP3O43295 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.06□□□□□ -1.76
SRGAP3O43295 HMGB3P8-201ENST00000449709 577 ntBASIC4.06□□□□□ -1.76
SRGAP3O43295 RNU7-170P-201ENST00000459303 61 ntBASIC4.06□□□□□ -1.76
SRGAP3O43295 FTH1P9-201ENST00000513251 355 ntBASIC4.06□□□□□ -1.76
SRGAP3O43295 AC011602.1-201ENST00000546484 331 ntBASIC4.06□□□□□ -1.76
SRGAP3O43295 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.06□□□□□ -1.76
SRGAP3O43295 AC073410.2-201ENST00000603240 332 ntBASIC4.06□□□□□ -1.76
SRGAP3O43295 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.06□□□□□ -1.76
SRGAP3O43295 AL355810.1-201ENST00000614629 552 ntBASIC4.06□□□□□ -1.76
SRGAP3O43295 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
SRGAP3O43295 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SRGAP3O43295 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SRGAP3O43295 SDAD1P2-201ENST00000441308 2028 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SRGAP3O43295 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SRGAP3O43295 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SRGAP3O43295 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SRGAP3O43295 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SRGAP3O43295 RNU6-384P-201ENST00000364900 104 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SRGAP3O43295 RPL21P38-201ENST00000418090 167 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 MTCO1P39-201ENST00000426148 480 ntBASIC4.05□□□□□ -1.76
SRGAP3O43295 AC091390.3-201ENST00000426478 338 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms