Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC7.69□□□□□ -1.18
MSH5O43196 SCGB1D5P-201ENST00000515134 247 ntBASIC7.69□□□□□ -1.18
MSH5O43196 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC7.69□□□□□ -1.18
MSH5O43196 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.69□□□□□ -1.18
MSH5O43196 TXNP4-201ENST00000575018 310 ntBASIC7.69□□□□□ -1.18
MSH5O43196 FKBP1AP1-201ENST00000594588 318 ntBASIC7.69□□□□□ -1.18
MSH5O43196 AC020891.4-201ENST00000605745 93 ntBASIC7.69□□□□□ -1.18
MSH5O43196 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
MSH5O43196 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.69□□□□□ -1.18
MSH5O43196 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
MSH5O43196 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.69□□□□□ -1.18
MSH5O43196 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
MSH5O43196 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
MSH5O43196 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.69□□□□□ -1.18
MSH5O43196 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
MSH5O43196 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
MSH5O43196 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
MSH5O43196 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
MSH5O43196 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MSH5O43196 SELENOWP1-201ENST00000322792 252 ntBASIC7.68□□□□□ -1.18
MSH5O43196 RNA5SP478-201ENST00000364657 115 ntBASIC7.68□□□□□ -1.18
MSH5O43196 SNORA25.9-201ENST00000365087 128 ntBASIC7.68□□□□□ -1.18
MSH5O43196 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
MSH5O43196 RNU6-57P-201ENST00000411348 103 ntBASIC7.68□□□□□ -1.18
MSH5O43196 Y_RNA.660-201ENST00000516002 120 ntBASIC7.68□□□□□ -1.18
MSH5O43196 AP003484.1-201ENST00000530974 250 ntBASIC7.68□□□□□ -1.18
MSH5O43196 MIR132-201ENST00000591554 101 ntBASIC7.68□□□□□ -1.18
MSH5O43196 IMMP1LP3-201ENST00000604197 224 ntBASIC7.68□□□□□ -1.18
MSH5O43196 Mico1.1-201ENST00000611698 204 ntBASIC7.68□□□□□ -1.18
MSH5O43196 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
MSH5O43196 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.68□□□□□ -1.18
MSH5O43196 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MSH5O43196 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
MSH5O43196 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
MSH5O43196 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
MSH5O43196 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
MSH5O43196 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
MSH5O43196 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
MSH5O43196 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
MSH5O43196 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
MSH5O43196 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
MSH5O43196 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
MSH5O43196 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC7.67□□□□□ -1.18
MSH5O43196 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
MSH5O43196 RNU1-22P-201ENST00000363334 158 ntBASIC7.67□□□□□ -1.18
MSH5O43196 RNA5SP515-201ENST00000364570 118 ntBASIC7.67□□□□□ -1.18
MSH5O43196 PTMAP5-201ENST00000393073 333 ntBASIC7.67□□□□□ -1.18
MSH5O43196 HMGN2P27-201ENST00000427352 270 ntBASIC7.67□□□□□ -1.18
MSH5O43196 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.67□□□□□ -1.18
MSH5O43196 RPL19P16-201ENST00000433839 588 ntBASIC7.67□□□□□ -1.18
MSH5O43196 AC092628.1-201ENST00000436250 252 ntBASIC7.67□□□□□ -1.18
MSH5O43196 RPL12P3-201ENST00000440080 396 ntBASIC7.67□□□□□ -1.18
MSH5O43196 AC087499.7-201ENST00000441958 109 ntBASIC7.67□□□□□ -1.18
MSH5O43196 RPSAP73-201ENST00000614820 330 ntBASIC7.67□□□□□ -1.18
MSH5O43196 RN7SL544P-201ENST00000617232 284 ntBASIC7.67□□□□□ -1.18
MSH5O43196 RN7SL763P-201ENST00000620922 284 ntBASIC7.67□□□□□ -1.18
MSH5O43196 AC138965.3-201ENST00000623875 498 ntBASIC7.67□□□□□ -1.18
MSH5O43196 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.67□□□□□ -1.18
MSH5O43196 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
MSH5O43196 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.67□□□□□ -1.18
MSH5O43196 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
MSH5O43196 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
MSH5O43196 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
MSH5O43196 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
MSH5O43196 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
MSH5O43196 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
MSH5O43196 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
MSH5O43196 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
MSH5O43196 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC7.66□□□□□ -1.18
MSH5O43196 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC7.66□□□□□ -1.18
MSH5O43196 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
MSH5O43196 RNA5SP500-201ENST00000364486 119 ntBASIC7.66□□□□□ -1.18
MSH5O43196 MIR3065-201ENST00000390137 79 ntBASIC7.66□□□□□ -1.18
MSH5O43196 AC110620.1-201ENST00000416042 228 ntBASIC7.66□□□□□ -1.18
MSH5O43196 BMS1P17-202ENST00000416720 316 ntBASIC7.66□□□□□ -1.18
MSH5O43196 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.66□□□□□ -1.18
MSH5O43196 RN7SL72P-201ENST00000460697 269 ntBASIC7.66□□□□□ -1.18
MSH5O43196 RN7SL329P-201ENST00000467740 299 ntBASIC7.66□□□□□ -1.18
MSH5O43196 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC7.66□□□□□ -1.18
MSH5O43196 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC7.66□□□□□ -1.18
MSH5O43196 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC7.66□□□□□ -1.18
MSH5O43196 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
MSH5O43196 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
MSH5O43196 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
MSH5O43196 PCAT14-202ENST00000627127 3935 ntBASIC7.65□□□□□ -1.18
MSH5O43196 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
MSH5O43196 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
MSH5O43196 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
MSH5O43196 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
MSH5O43196 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
MSH5O43196 Y_RNA.40-201ENST00000362645 93 ntBASIC7.65□□□□□ -1.18
MSH5O43196 RNA5SP350-201ENST00000363298 111 ntBASIC7.65□□□□□ -1.18
MSH5O43196 RN7SKP280-201ENST00000364196 304 ntBASIC7.65□□□□□ -1.18
MSH5O43196 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
MSH5O43196 RNU7-113P-201ENST00000459273 62 ntBASIC7.65□□□□□ -1.18
MSH5O43196 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
MSH5O43196 RN7SL727P-201ENST00000482164 296 ntBASIC7.65□□□□□ -1.18
MSH5O43196 RNU6-1096P-201ENST00000517089 102 ntBASIC7.65□□□□□ -1.18
MSH5O43196 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
MSH5O43196 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms