Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.66□□□□□ -1.98
SMAD9O15198 AL035425.3-201ENST00000564206 4996 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AC135776.4-201ENST00000624300 1904 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMAD9O15198 SNORA5B-201ENST00000363786 132 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 RNU6-1083P-201ENST00000384022 107 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 Y_RNA.510-201ENST00000384511 114 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AL512633.1-201ENST00000399931 655 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AL133475.1-201ENST00000404414 305 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AL162578.1-201ENST00000406202 378 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 RNU6-1328P-201ENST00000410938 106 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.66□□□□□ -1.98
SMAD9O15198 SNORD56-201ENST00000413522 71 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.66□□□□□ -1.98
SMAD9O15198 AC092427.1-202ENST00000430569 476 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AC025750.2-201ENST00000442609 450 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SMAD9O15198 AP004217.1-201ENST00000480579 346 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 RPL23AP49-201ENST00000492925 468 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 RNU6-377P-201ENST00000515965 102 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 SNORA31.6-201ENST00000516241 130 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 RNU6-358P-201ENST00000516564 75 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 SCARNA11.3-201ENST00000517276 130 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AC087854.1-201ENST00000519706 414 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AF235103.2-201ENST00000525753 346 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.66□□□□□ -1.98
SMAD9O15198 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SMAD9O15198 CR383656.8-201ENST00000549046 145 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.66□□□□□ -1.98
SMAD9O15198 CTHRC1P1-201ENST00000605383 469 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 uc_338.14-201ENST00000613162 166 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 AC006504.8-201ENST00000621046 635 ntBASIC2.66□□□□□ -1.98
SMAD9O15198 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.66□□□□□ -1.98
SMAD9O15198 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SMAD9O15198 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
SMAD9O15198 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
SMAD9O15198 AC000403.1-201ENST00000613696 3585 ntBASIC2.65□□□□□ -1.98
SMAD9O15198 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SMAD9O15198 Y_RNA.86-201ENST00000363020 111 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 Y_RNA.100-201ENST00000363141 102 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 RNU6-527P-201ENST00000363425 104 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 RNU6-461P-201ENST00000364195 107 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 U3.12-201ENST00000364498 214 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SMAD9O15198 SNORA44-201ENST00000384584 132 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 Y_RNA.530-201ENST00000384587 101 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.65□□□□□ -1.99
SMAD9O15198 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.65□□□□□ -1.99
SMAD9O15198 RPL35AP12-201ENST00000425362 338 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 Z98742.2-201ENST00000431564 187 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.65□□□□□ -1.99
SMAD9O15198 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.65□□□□□ -1.99
SMAD9O15198 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.65□□□□□ -1.99
SMAD9O15198 RN7SL633P-201ENST00000488974 297 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 AC109479.2-201ENST00000517842 174 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 AC025423.5-201ENST00000550230 219 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 AC060780.3-201ENST00000589464 80 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 BNIP3P10-201ENST00000605360 577 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
SMAD9O15198 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.65□□□□□ -1.99
SMAD9O15198 U4.7-201ENST00000638126 106 ntBASIC2.65□□□□□ -1.99
SMAD9O15198 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.65□□□□□ -1.99
SMAD9O15198 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.65□□□□□ -1.99
SMAD9O15198 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.65□□□□□ -1.99
SMAD9O15198 RBBP8P1-201ENST00000449447 1844 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 RNU6-1252P-201ENST00000363054 104 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 SNORA80A-201ENST00000363922 136 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 MIR450B-201ENST00000401182 78 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 AL513475.1-201ENST00000406602 315 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 USP9YP20-201ENST00000419224 558 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 RPL30P16-201ENST00000419341 429 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SMAD9O15198 NDUFA5P4-201ENST00000436704 385 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.64□□□□□ -1.99
SMAD9O15198 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SMAD9O15198 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.64□□□□□ -1.99
SMAD9O15198 RPL31P58-201ENST00000469001 379 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.64□□□□□ -1.99
SMAD9O15198 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.64□□□□□ -1.99
SMAD9O15198 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.64□□□□□ -1.99
SMAD9O15198 MIR3117-201ENST00000584034 78 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.64□□□□□ -1.99
SMAD9O15198 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.64□□□□□ -1.99
SMAD9O15198 AP000787.2-201ENST00000604432 568 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 RBM11P1-201ENST00000604951 799 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 AC093913.1-201ENST00000614178 329 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 AC138627.2-201ENST00000624202 601 ntBASIC2.64□□□□□ -1.99
SMAD9O15198 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SMAD9O15198 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.64□□□□□ -1.99
SMAD9O15198 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMAD9O15198 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.63□□□□□ -1.99
SMAD9O15198 SNORD56.1-201ENST00000362913 68 ntBASIC2.63□□□□□ -1.99
SMAD9O15198 SNORD113-7-201ENST00000363762 77 ntBASIC2.63□□□□□ -1.99
SMAD9O15198 SNORA51.4-201ENST00000364993 124 ntBASIC2.63□□□□□ -1.99
SMAD9O15198 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMAD9O15198 SNORA32.2-201ENST00000384049 122 ntBASIC2.63□□□□□ -1.99
SMAD9O15198 RNU6-843P-201ENST00000384454 104 ntBASIC2.63□□□□□ -1.99
SMAD9O15198 SNORD73A-201ENST00000386062 65 ntBASIC2.63□□□□□ -1.99
SMAD9O15198 AC074117.2-201ENST00000417130 397 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms