Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AL121601.2-201ENST00000438019 707 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 RNU6-261P-201ENST00000459506 102 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 Y_RNA.704-201ENST00000516851 102 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AC010186.2-204ENST00000537668 439 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AC023043.3-201ENST00000593113 385 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 RPS15AP11-201ENST00000594193 385 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AC116312.1-201ENST00000606841 314 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AC069294.1-201ENST00000608397 350 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AC093788.1-201ENST00000609356 927 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 U2.17-201ENST00000611454 95 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 RNU6-78P-201ENST00000362897 107 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 SNORD56.1-201ENST00000362913 68 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 Y_RNA.480-201ENST00000384364 102 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 RPLP0P7-201ENST00000416050 667 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AC074117.2-201ENST00000417130 397 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 TIMM9P3-201ENST00000428659 274 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 RPL7P12-201ENST00000446719 750 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 RPS3P1-201ENST00000456781 192 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 RPL7P43-201ENST00000478876 753 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 SRIP1-201ENST00000489235 288 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AC019235.1-201ENST00000503847 207 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AC091435.1-201ENST00000505442 584 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 CCDC34P1-201ENST00000507441 517 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AC008413.1-201ENST00000511864 177 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 TBCAP3-201ENST00000512475 312 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 Y_RNA.655-201ENST00000515919 96 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 RNU6-1038P-201ENST00000516516 104 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 Y_RNA.693-201ENST00000516641 110 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AC079598.5-201ENST00000547460 117 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 RNU6-91P-201ENST00000607774 107 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AC096772.1-201ENST00000609146 564 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 Z82243.1-201ENST00000609432 473 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AC010297.1-201ENST00000623948 149 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 Z69720.2-201ENST00000624755 279 ntBASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.35□□□□□ -2.03
NPIPA3F8WFD2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 Y_RNA.3-201ENST00000362331 103 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 SNORD114-19-201ENST00000363072 75 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 RNU6-527P-201ENST00000363425 104 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 Y_RNA.399-201ENST00000383955 105 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 MIR592-201ENST00000384959 97 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 U6atac.2-201ENST00000408644 118 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 RNU7-26P-201ENST00000458980 63 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 RNU7-167P-201ENST00000459160 62 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 TRBV12-1-201ENST00000479785 344 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 RN7SL297P-201ENST00000483161 293 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AC140059.1-201ENST00000489238 361 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 SNORA25.17-201ENST00000517184 124 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 SNORA31.23-201ENST00000517219 133 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AC027176.1-201ENST00000560204 514 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AC105245.1-201ENST00000581934 244 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AC025165.5-201ENST00000602802 578 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AL121917.1-203ENST00000605534 577 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 AC244517.12-201ENST00000623581 663 ntBASIC2.34□□□□□ -2.03
NPIPA3F8WFD2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
NPIPA3F8WFD2 OR56A5-201ENST00000340110 738 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 RNU6-266P-201ENST00000364225 107 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 RNU4-66P-201ENST00000365199 138 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 RNU6-483P-201ENST00000384088 108 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 RNU1-138P-201ENST00000384093 164 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 RNU6-443P-201ENST00000384780 107 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 RNA5SP219-201ENST00000390940 113 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 RNA5SP210-201ENST00000391034 120 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 AL590002.1-201ENST00000406554 418 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 OR9R1P-201ENST00000412200 877 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 SUMO1P4-201ENST00000429430 302 ntBASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.33□□□□□ -2.04
NPIPA3F8WFD2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms