Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MIR620-201ENST00000385232 95 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 RPS15AP10-201ENST00000432472 382 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 MTND5P2-201ENST00000442927 1142 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 RNU1-98P-201ENST00000458992 160 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AC112204.1-201ENST00000502591 103 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AC091951.3-201ENST00000504093 246 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 RNU6-965P-201ENST00000516721 96 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 COPS8P3-201ENST00000526024 482 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 BNIP3P6-201ENST00000549284 499 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 MTND4P33-201ENST00000556706 766 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AC078795.2-201ENST00000602835 1252 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AL139286.2-201ENST00000606838 396 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AP002782.1-201ENST00000623107 614 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 AP000648.3-201ENST00000623539 4507 ntBASIC1.29□□□□□ -2.2
RBFOX3A6NFN3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 MIR126-201ENST00000362291 85 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 RNU4-1-201ENST00000363925 141 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 MIR578-201ENST00000384828 96 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 RPS3AP36-201ENST00000398190 775 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 RNA5SP100-201ENST00000410903 110 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 RNA5SP59-201ENST00000410922 110 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 BTF3L4P1-201ENST00000413813 468 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 AC137499.1-201ENST00000427602 88 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 AC112492.4-201ENST00000456549 352 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 RPL30P6-201ENST00000475925 342 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 AP000797.1-201ENST00000478870 387 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 RPL30P1-201ENST00000488676 339 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 RPS29P11-201ENST00000496507 171 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 AC093259.1-201ENST00000509755 300 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 FAM206BP-201ENST00000510179 541 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 AL354943.1-201ENST00000572103 781 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 DEFB131E-202ENST00000602581 683 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 AL136363.2-201ENST00000604173 851 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 AC016925.2-201ENST00000605108 242 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 RMST_7.1-201ENST00000621935 268 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
RBFOX3A6NFN3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 MTND5P10-201ENST00000603719 1809 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 RNU6-661P-201ENST00000362409 107 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 RNU6-660P-201ENST00000364566 109 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 RNU6-1179P-201ENST00000384667 107 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 SNORA40.18-201ENST00000391200 128 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 CISD1P1-201ENST00000393907 327 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 RAP1BP3-201ENST00000407180 549 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 MIR1294-201ENST00000408503 142 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 MTND4P20-201ENST00000424125 869 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AL035666.1-201ENST00000446195 348 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AL360271.2-201ENST00000447710 161 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AL009048.1-201ENST00000450437 298 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AC116337.1-201ENST00000509680 687 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AC108078.2-201ENST00000510750 236 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 RNU6-123P-201ENST00000516163 102 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 RNU6-548P-201ENST00000517083 115 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AC090888.2-201ENST00000559765 1144 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AC091135.1-201ENST00000585943 307 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AC022022.2-201ENST00000602989 360 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AL031281.1-201ENST00000604049 488 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AC018714.1-201ENST00000605028 208 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AL158032.1-201ENST00000605401 106 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AL359757.2-201ENST00000624309 274 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 MIR1248-201ENST00000629190 106 ntBASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.27□□□□□ -2.21
RBFOX3A6NFN3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
RBFOX3A6NFN3 MIR424-201ENST00000362227 98 ntBASIC1.26□□□□□ -2.21
RBFOX3A6NFN3 RNU1-42P-201ENST00000364033 160 ntBASIC1.26□□□□□ -2.21
RBFOX3A6NFN3 RNU6-1200P-201ENST00000384162 107 ntBASIC1.26□□□□□ -2.21
RBFOX3A6NFN3 MIR320A-201ENST00000385302 82 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms