Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC016831.2-201ENST00000417179 352 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 USP9YP18-201ENST00000425912 695 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MTND4P15-201ENST00000437913 1033 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL035666.1-201ENST00000446195 348 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 EEF1E1P1-201ENST00000446998 430 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 DUXAP8-207ENST00000456786 622 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RPS26P55-201ENST00000471178 356 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC034244.1-201ENST00000507687 207 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC093259.1-201ENST00000509755 300 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 FABP5P5-201ENST00000515537 406 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 SNORA31.16-201ENST00000516773 139 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RN7SKP256-201ENST00000517201 314 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC019288.1-201ENST00000557918 224 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 SUB1P4-201ENST00000566062 339 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MTCYBP33-201ENST00000575007 1130 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 SNORA77B-201ENST00000578179 125 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AP001981.2-201ENST00000603241 418 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 BNIP3P9-201ENST00000603714 553 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC093648.1-201ENST00000623546 606 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-23P-201ENST00000363283 107 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-701P-201ENST00000384059 107 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-843P-201ENST00000384454 104 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 NCOR1P3-201ENST00000420479 303 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RAC1P6-201ENST00000423911 575 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MTCO3P5-201ENST00000433620 714 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 SNRPEP7-201ENST00000438350 220 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 CR769776.1-201ENST00000441254 787 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL022238.1-201ENST00000442557 355 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MTND2P4-201ENST00000445034 1004 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RPL30P1-201ENST00000488676 339 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RN7SKP265-201ENST00000516448 223 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL356057.1-201ENST00000533798 831 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RPL21P5-201ENST00000554662 472 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL136520.1-202ENST00000555494 763 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC109446.2-201ENST00000567872 497 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC012414.6-201ENST00000568241 401 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MIR3169-201ENST00000578032 83 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 VN1R83P-201ENST00000595685 445 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC007363.1-201ENST00000604736 620 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC099785.1-201ENST00000605697 437 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AP002802.2-201ENST00000605877 235 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 DDX43P2-201ENST00000604753 1354 ntBASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.78□□□□□ -2.28
TCRBV4S1A1TA0A5B7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.29
TCRBV4S1A1TA0A5B7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
TCRBV4S1A1TA0A5B7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.78□□□□□ -2.29
TCRBV4S1A1TA0A5B7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU6-655P-201ENST00000362858 107 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNA5SP493-201ENST00000364115 91 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 Y_RNA.796-201ENST00000364268 102 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU4-38P-201ENST00000364472 129 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 SNORA25.8-201ENST00000364831 128 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 Y_RNA.799-201ENST00000364992 102 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU6-622P-201ENST00000384272 103 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 Y_RNA.534-201ENST00000384599 112 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MIR618-201ENST00000385287 98 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RNU6-817P-201ENST00000391083 104 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 FCF1P10-201ENST00000407590 479 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RPL21P90-201ENST00000415692 466 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC083875.1-201ENST00000419509 405 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AL669831.1-202ENST00000428504 417 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AL135790.2-201ENST00000437701 267 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 MTND4P25-201ENST00000441039 533 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 NEFMP1-201ENST00000443423 1006 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AL606517.1-201ENST00000446914 387 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RPL23AP35-201ENST00000451906 501 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 AC087477.1-201ENST00000465747 340 ntBASIC0.77□□□□□ -2.29
TCRBV4S1A1TA0A5B7 RPL30P6-201ENST00000475925 342 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms