Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 Y_RNA.154-201ENST00000363624 102 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 Y_RNA.813-201ENST00000364639 102 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 RNY3P1-201ENST00000365085 102 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 RNY3-201ENST00000365484 102 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-827P-201ENST00000365553 106 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 Y_RNA.490-201ENST00000384413 102 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-1297P-201ENST00000384415 104 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 BMS1P22-201ENST00000414726 313 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 RPS15AP10-201ENST00000432472 382 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AL031274.1-201ENST00000450334 232 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 BX510359.1-201ENST00000456973 237 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-559P-201ENST00000516151 98 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-1016P-201ENST00000516689 94 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 HPRT1P3-201ENST00000539521 576 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 FRG2DP-202ENST00000566967 323 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 MIR4719-201ENST00000585233 84 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AC009314.1-201ENST00000603871 304 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AL121917.1-203ENST00000605534 577 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AL050343.2-201ENST00000607338 280 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AC135507.2-201ENST00000612443 309 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AC244517.12-201ENST00000623581 663 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AL359757.2-201ENST00000624309 274 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 U6.98-201ENST00000637157 84 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 AC006026.1-201ENST00000444025 1803 ntBASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-694P-201ENST00000364071 147 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-1280P-201ENST00000365211 107 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 MIR7-3-201ENST00000384898 110 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 MIR512-1-201ENST00000384913 84 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-328P-201ENST00000390887 106 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 SAR1AP4-201ENST00000429225 591 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 AC236972.2-201ENST00000434979 310 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 SNORD5.1-201ENST00000458800 75 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 SNORD19B-201ENST00000459623 84 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 RNU1-54P-201ENST00000517181 120 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 AL121821.2-201ENST00000556081 394 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 AC069200.1-201ENST00000609511 323 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 AL133215.3-201ENST00000609801 448 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 AL442067.2-201ENST00000614033 363 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 MIR6128-201ENST00000615528 109 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 AC008669.1-201ENST00000565823 2178 ntBASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TCRBV7S3A2A0A539 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AC092593.1-201ENST00000515413 1815 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 MTND4P23-201ENST00000447723 1363 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-105P-201ENST00000363909 104 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 RNA5SP72-201ENST00000364442 117 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 Y_RNA.431-201ENST00000384086 102 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 Y_RNA.460-201ENST00000384255 102 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 SNORD116-29-201ENST00000384516 83 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-601P-201ENST00000384540 107 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 PTMAP5-201ENST00000393073 333 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 FTH1P15-201ENST00000406984 280 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AC096649.2-201ENST00000416186 393 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AL161651.1-201ENST00000440882 223 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 PCMTD1P1-201ENST00000455560 355 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 RN7SL807P-201ENST00000470923 297 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 MRPL42P6-201ENST00000486397 371 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AC026782.1-201ENST00000512952 449 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 RNU6-581P-201ENST00000516214 105 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 APOOP3-201ENST00000536787 586 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AC103996.1-201ENST00000555468 102 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AC124303.1-201ENST00000605703 360 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AC011890.2-201ENST00000613393 294 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AC108206.1-201ENST00000570186 4159 ntBASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TCRBV7S3A2A0A539 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.9□□□□□ -1.94
TCRBV7S3A2A0A539 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
TCRBV7S3A2A0A539 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-428P-201ENST00000362942 107 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 Y_RNA.151-201ENST00000363566 112 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms