Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 MTCO3P10-201ENST00000455912 772 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AK3P2-201ENST00000507976 429 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 PTP4A1P4-201ENST00000512479 322 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AC026403.1-201ENST00000518938 295 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 CR383656.8-201ENST00000549046 145 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AC103996.1-201ENST00000555468 102 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AC018889.1-201ENST00000605372 397 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AC080078.3-201ENST00000605407 463 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 AC004852.3-201ENST00000614131 326 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 MTND5P10-201ENST00000603719 1809 ntBASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHA3Q9Y5H8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-428P-201ENST00000362942 107 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 U3.6-201ENST00000363622 211 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-933P-201ENST00000384424 107 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 RNA5SP252-201ENST00000391131 119 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 RPL32P35-201ENST00000415214 394 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AC005300.1-201ENST00000428401 373 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 NIPA2P5-201ENST00000452282 464 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 RPL30P15-201ENST00000457129 321 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 U8.21-201ENST00000459536 136 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AC008571.1-201ENST00000467232 300 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AC034236.1-201ENST00000469891 373 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AC093303.1-201ENST00000514549 295 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 SRGNP1-201ENST00000603392 451 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AC024220.1-201ENST00000603675 484 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AL080274.1-201ENST00000605565 220 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AC091903.1-201ENST00000624322 454 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 AC134503.1-201ENST00000633048 54 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 MIR3199-2-201ENST00000636243 86 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 GABRG2-229ENST00000641017 3628 ntBASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHA3Q9Y5H8 Y_RNA.128-201ENST00000363391 112 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.138-201ENST00000363462 102 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-105P-201ENST00000363909 104 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-1317P-201ENST00000364582 104 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-336P-201ENST00000364891 107 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-1280P-201ENST00000365211 107 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.395-201ENST00000383945 109 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.404-201ENST00000383978 102 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-842P-201ENST00000384269 107 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-790P-201ENST00000384479 105 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 MIR7-3-201ENST00000384898 110 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AL513475.1-201ENST00000406602 315 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AC023141.4-201ENST00000412031 328 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 ADAM3A-203ENST00000461344 2157 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AC114801.2-201ENST00000503825 781 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AC116655.1-201ENST00000508324 901 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-1213P-201ENST00000517075 94 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AC010186.2-204ENST00000537668 439 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AC006199.1-201ENST00000548728 219 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 MIR3922-201ENST00000585192 84 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 BNIP3P22-201ENST00000593399 556 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 MTND5P19-201ENST00000424872 1794 ntBASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHA3Q9Y5H8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.197-201ENST00000364004 102 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 U8.8-201ENST00000365399 135 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 MIR218-2-201ENST00000385006 110 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 RPL21P3-201ENST00000395517 478 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-174P-201ENST00000410406 106 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms