Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-607P-201ENST00000411283 108 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC017079.2-201ENST00000416102 485 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC096644.2-201ENST00000429278 159 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AL590664.1-201ENST00000448065 339 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC087588.1-201ENST00000462203 316 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC128713.1-201ENST00000471495 306 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC018437.1-201ENST00000492214 406 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 SUMO2P6-201ENST00000505273 288 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC008716.1-201ENST00000511084 513 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 LRRC37A5P-203ENST00000580181 585 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 MIR8057-201ENST00000620957 69 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 Z69720.2-201ENST00000624755 279 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 RNU1-18P-201ENST00000363062 164 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 MIR514A1-201ENST00000385133 98 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 MIR301A-201ENST00000385261 86 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 SNORD73A-201ENST00000386062 65 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 SNORA48.2-201ENST00000390926 124 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 RPS4XP3-201ENST00000398541 413 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 AL445529.1-201ENST00000398713 389 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 PCMTD1P1-201ENST00000455560 355 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 RNA5SP310-201ENST00000459084 116 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 HMGB1P30-201ENST00000492455 606 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 RNA5SP471-201ENST00000516971 106 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 MED28P6-201ENST00000558776 231 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 AC012493.2-201ENST00000595083 291 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 AL133393.1-201ENST00000603277 287 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 SNORD39.4-201ENST00000620099 78 ntBASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CTDP1Q9Y5B0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.47-201ENST00000362697 108 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-283P-201ENST00000364788 107 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 RNU1-115P-201ENST00000365329 160 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.455-201ENST00000384230 98 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-842P-201ENST00000384269 107 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 MIR128-1-201ENST00000384921 82 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 NDUFB4P4-201ENST00000404822 243 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 U3.42-201ENST00000408746 214 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 RNA5SP38-201ENST00000410750 119 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-55P-201ENST00000411092 107 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 HMGB3P2-201ENST00000411913 584 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AC126124.2-201ENST00000413542 321 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AL353621.1-201ENST00000418219 243 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AC243428.1-201ENST00000421099 264 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AP002884.2-201ENST00000471647 395 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AC068781.1-201ENST00000488231 618 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 GNAI2P1-201ENST00000541815 315 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AC109446.1-201ENST00000566172 220 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AC092447.9-201ENST00000603395 144 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AC098826.3-201ENST00000603823 466 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 YPEL5P2-201ENST00000605553 359 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AC022149.2-201ENST00000621061 203 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 MIR7153-201ENST00000637758 57 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 AL513302.2-201ENST00000562313 1842 ntBASIC3.86□□□□□ -1.79
CTDP1Q9Y5B0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 AC005592.1-201ENST00000566527 1640 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 DEFB108F-201ENST00000344638 222 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.176-201ENST00000363815 109 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.324-201ENST00000365165 102 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-790P-201ENST00000384479 105 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 SNORA41-201ENST00000384675 132 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 AC096664.2-201ENST00000411843 406 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 CYCSP33-201ENST00000414485 327 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 FTH1P25-201ENST00000447665 469 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms