Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MTCO2P25-201ENST00000447065 681 ntBASIC0.15□□□□□ -2.39
AP4S1Q9Y587 MTND5P8-201ENST00000449817 1083 ntBASIC0.15□□□□□ -2.39
AP4S1Q9Y587 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.15□□□□□ -2.39
AP4S1Q9Y587 MTCYBP40-201ENST00000509390 1135 ntBASIC0.15□□□□□ -2.39
AP4S1Q9Y587 RNU6-496P-201ENST00000516145 99 ntBASIC0.15□□□□□ -2.39
AP4S1Q9Y587 RNA5SP255-201ENST00000516370 107 ntBASIC0.15□□□□□ -2.39
AP4S1Q9Y587 RNU5B-3P-201ENST00000516601 115 ntBASIC0.15□□□□□ -2.39
AP4S1Q9Y587 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.15□□□□□ -2.39
AP4S1Q9Y587 AL590705.4-201ENST00000532209 134 ntBASIC0.15□□□□□ -2.39
AP4S1Q9Y587 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.15□□□□□ -2.39
AP4S1Q9Y587 AC136619.2-201ENST00000563361 631 ntBASIC0.15□□□□□ -2.39
AP4S1Q9Y587 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
AP4S1Q9Y587 AC009509.4-201ENST00000619202 509 ntBASIC0.15□□□□□ -2.39
AP4S1Q9Y587 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.15□□□□□ -2.39
AP4S1Q9Y587 SNORD114-6-201ENST00000364393 72 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 RNU6-16P-201ENST00000384385 107 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 RNU6-160P-201ENST00000384591 107 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 MIR1276-201ENST00000408707 83 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 MIR548J-201ENST00000408833 112 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.14□□□□□ -2.39
AP4S1Q9Y587 RNA5SP437-201ENST00000517249 129 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 AP001893.2-201ENST00000526949 202 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 APOOP3-201ENST00000536787 586 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.14□□□□□ -2.39
AP4S1Q9Y587 AC012065.4-201ENST00000602445 679 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
AP4S1Q9Y587 AC018926.1-201ENST00000616335 435 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 AL158163.2-201ENST00000619110 700 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.14□□□□□ -2.39
AP4S1Q9Y587 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
AP4S1Q9Y587 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
AP4S1Q9Y587 Y_RNA.191-201ENST00000363972 113 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AC019178.2-201ENST00000423595 505 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AC093422.3-201ENST00000428506 305 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.13□□□□□ -2.39
AP4S1Q9Y587 TPRKBP1-201ENST00000456243 481 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AC116655.1-201ENST00000508324 901 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AL356057.1-201ENST00000533798 831 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AC018630.3-201ENST00000542637 96 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.13□□□□□ -2.39
AP4S1Q9Y587 MIR151B-201ENST00000584249 96 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AC107952.2-201ENST00000606048 486 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AC017083.3-201ENST00000609955 700 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 MIR6504-201ENST00000613520 61 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 MIR6513-201ENST00000621188 64 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AC130454.1-201ENST00000622948 401 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 AC120349.3-201ENST00000624377 529 ntBASIC0.13□□□□□ -2.39
AP4S1Q9Y587 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
AP4S1Q9Y587 RNU6-944P-201ENST00000364023 107 ntBASIC0.12□□□□□ -2.39
AP4S1Q9Y587 RNU6-910P-201ENST00000390844 107 ntBASIC0.12□□□□□ -2.39
AP4S1Q9Y587 SNORD12-201ENST00000391002 90 ntBASIC0.12□□□□□ -2.39
AP4S1Q9Y587 RNU6-564P-201ENST00000410983 104 ntBASIC0.12□□□□□ -2.39
AP4S1Q9Y587 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.12□□□□□ -2.39
AP4S1Q9Y587 AC092451.2-201ENST00000538746 658 ntBASIC0.12□□□□□ -2.39
AP4S1Q9Y587 AL158211.4-201ENST00000606988 584 ntBASIC0.12□□□□□ -2.39
AP4S1Q9Y587 AL359757.2-201ENST00000624309 274 ntBASIC0.12□□□□□ -2.39
AP4S1Q9Y587 AL359740.1-201ENST00000624340 592 ntBASIC0.12□□□□□ -2.39
AP4S1Q9Y587 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
AP4S1Q9Y587 RNU4-79P-201ENST00000362764 141 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 MIR942-201ENST00000401111 86 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
AP4S1Q9Y587 AC092423.1-201ENST00000430165 186 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 OR6C5P-201ENST00000452388 923 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.11□□□□□ -2.39
AP4S1Q9Y587 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 RNU6-237P-201ENST00000515985 71 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 RNU2-53P-201ENST00000516257 147 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 AC103833.1-201ENST00000517442 172 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 MRPS36P5-201ENST00000551909 298 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 HMGB1P33-201ENST00000563485 527 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 AC068790.6-201ENST00000602558 258 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 AC105148.1-201ENST00000604961 409 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 AC009032.1-201ENST00000617574 431 ntBASIC0.11□□□□□ -2.39
AP4S1Q9Y587 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.11□□□□□ -2.39
AP4S1Q9Y587 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
AP4S1Q9Y587 RNU6-619P-201ENST00000365146 108 ntBASIC0.1□□□□□ -2.39
AP4S1Q9Y587 RNU6-891P-201ENST00000384280 111 ntBASIC0.1□□□□□ -2.39
AP4S1Q9Y587 BTF3L4P3-201ENST00000418879 476 ntBASIC0.1□□□□□ -2.39
AP4S1Q9Y587 RPL32P14-201ENST00000463196 378 ntBASIC0.1□□□□□ -2.39
AP4S1Q9Y587 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.1□□□□□ -2.39
AP4S1Q9Y587 AC008628.1-201ENST00000508663 265 ntBASIC0.1□□□□□ -2.39
AP4S1Q9Y587 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.1□□□□□ -2.39
AP4S1Q9Y587 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.1□□□□□ -2.39
AP4S1Q9Y587 MIR4452-201ENST00000583004 71 ntBASIC0.1□□□□□ -2.39
AP4S1Q9Y587 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
AP4S1Q9Y587 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
AP4S1Q9Y587 RNU6-1280P-201ENST00000365211 107 ntBASIC0.09□□□□□ -2.4
AP4S1Q9Y587 RNU6-1237P-201ENST00000384777 107 ntBASIC0.09□□□□□ -2.4
AP4S1Q9Y587 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
AP4S1Q9Y587 DHFRP6-201ENST00000401776 268 ntBASIC0.09□□□□□ -2.4
AP4S1Q9Y587 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
AP4S1Q9Y587 MTND2P5-201ENST00000432656 1006 ntBASIC0.09□□□□□ -2.4
AP4S1Q9Y587 RPL36AP53-201ENST00000432891 316 ntBASIC0.09□□□□□ -2.4
AP4S1Q9Y587 AL603825.1-201ENST00000438481 80 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms